Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HttP42859 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HttP42859 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HttP42859 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HttP42859 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.82□□□□□ -1.64
HttP42859 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.82□□□□□ -1.64
HttP42859 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HttP42859 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HttP42859 Gm8666-201ENSMUST00000117517 292 ntBASIC4.82□□□□□ -1.64
HttP42859 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.82□□□□□ -1.64
HttP42859 Gm12654-201ENSMUST00000120387 587 ntBASIC4.82□□□□□ -1.64
HttP42859 Gm22320-201ENSMUST00000157149 312 ntBASIC4.82□□□□□ -1.64
HttP42859 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC4.82□□□□□ -1.64
HttP42859 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
HttP42859 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.82□□□□□ -1.64
HttP42859 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HttP42859 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HttP42859 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HttP42859 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HttP42859 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HttP42859 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HttP42859 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
HttP42859 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
HttP42859 Gm14473-201ENSMUST00000122269 557 ntBASIC4.81□□□□□ -1.64
HttP42859 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.81□□□□□ -1.64
HttP42859 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HttP42859 Mir6914-201ENSMUST00000184999 69 ntBASIC4.81□□□□□ -1.64
HttP42859 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.81□□□□□ -1.64
HttP42859 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.81□□□□□ -1.64
HttP42859 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Gm25481-201ENSMUST00000083221 158 ntBASIC4.81□□□□□ -1.64
HttP42859 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
HttP42859 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.81□□□□□ -1.64
HttP42859 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.81□□□□□ -1.64
HttP42859 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.81□□□□□ -1.64
HttP42859 Gm10357-201ENSMUST00000159886 264 ntBASIC4.81□□□□□ -1.64
HttP42859 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.81□□□□□ -1.64
HttP42859 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.81□□□□□ -1.64
HttP42859 Gm37104-201ENSMUST00000193278 196 ntBASIC4.81□□□□□ -1.64
HttP42859 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.81□□□□□ -1.64
HttP42859 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HttP42859 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HttP42859 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HttP42859 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Gm24788-201ENSMUST00000104283 156 ntBASIC4.81□□□□□ -1.64
HttP42859 Gm25667-201ENSMUST00000157701 275 ntBASIC4.81□□□□□ -1.64
HttP42859 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HttP42859 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HttP42859 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.81□□□□□ -1.64
HttP42859 Gm42453-201ENSMUST00000200477 409 ntBASIC4.81□□□□□ -1.64
HttP42859 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC4.81□□□□□ -1.64
HttP42859 AC130673.2-201ENSMUST00000228091 797 ntBASIC4.81□□□□□ -1.64
HttP42859 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.81□□□□□ -1.64
HttP42859 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HttP42859 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HttP42859 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HttP42859 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HttP42859 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HttP42859 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HttP42859 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HttP42859 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HttP42859 Gm12893-201ENSMUST00000121732 275 ntBASIC4.8□□□□□ -1.64
HttP42859 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HttP42859 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.8□□□□□ -1.64
HttP42859 Gm37241-201ENSMUST00000191736 523 ntBASIC4.8□□□□□ -1.64
HttP42859 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC4.8□□□□□ -1.64
HttP42859 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.8□□□□□ -1.64
HttP42859 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC4.8□□□□□ -1.64
HttP42859 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HttP42859 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HttP42859 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HttP42859 Gm37769-201ENSMUST00000193753 2369 ntBASIC4.8□□□□□ -1.64
HttP42859 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.8□□□□□ -1.64
HttP42859 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.8□□□□□ -1.64
HttP42859 Gm37304-201ENSMUST00000193833 2886 ntBASIC4.8□□□□□ -1.64
HttP42859 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.8□□□□□ -1.64
HttP42859 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HttP42859 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.8□□□□□ -1.64
HttP42859 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC4.8□□□□□ -1.64
HttP42859 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.8□□□□□ -1.64
HttP42859 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HttP42859 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms