Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.58□□□□□ -1.68
Sox6P40645 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Sox6P40645 Gm24690-201ENSMUST00000157759 97 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Gm26490-201ENSMUST00000157879 140 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Gm23965-201ENSMUST00000157969 142 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Gm6632-201ENSMUST00000168425 954 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sox6P40645 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sox6P40645 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sox6P40645 Gm9320-201ENSMUST00000184151 473 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.58□□□□□ -1.68
Sox6P40645 Gm9443-201ENSMUST00000188406 816 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Gm29475-201ENSMUST00000190767 312 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Gm2147-201ENSMUST00000193588 639 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Gm29813-201ENSMUST00000195856 447 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Gm43712-201ENSMUST00000198020 291 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Gm43794-201ENSMUST00000200971 692 ntBASIC4.58□□□□□ -1.68
Sox6P40645 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sox6P40645 Gm18007-201ENSMUST00000205019 844 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Gm44607-201ENSMUST00000205611 1090 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Gm45171-201ENSMUST00000206360 736 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sox6P40645 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.58□□□□□ -1.68
Sox6P40645 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sox6P40645 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.58□□□□□ -1.68
Sox6P40645 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sox6P40645 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sox6P40645 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Sox6P40645 Gm42440-201ENSMUST00000197906 2284 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sox6P40645 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sox6P40645 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sox6P40645 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sox6P40645 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sox6P40645 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Sox6P40645 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.58□□□□□ -1.68
Sox6P40645 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sox6P40645 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.58□□□□□ -1.68
Sox6P40645 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.57□□□□□ -1.68
Sox6P40645 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sox6P40645 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.57□□□□□ -1.68
Sox6P40645 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.57□□□□□ -1.68
Sox6P40645 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.57□□□□□ -1.68
Sox6P40645 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sox6P40645 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sox6P40645 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Sox6P40645 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Sox6P40645 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.57□□□□□ -1.68
Sox6P40645 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm12261-201ENSMUST00000117499 645 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm13491-201ENSMUST00000118267 235 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm12007-201ENSMUST00000120978 597 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm23837-201ENSMUST00000122656 286 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.57□□□□□ -1.68
Sox6P40645 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.57□□□□□ -1.68
Sox6P40645 Gm25389-201ENSMUST00000157340 286 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm23537-201ENSMUST00000157536 330 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm8358-201ENSMUST00000167222 555 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm5139-201ENSMUST00000175943 249 ntBASIC4.57□□□□□ -1.68
Sox6P40645 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sox6P40645 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.57□□□□□ -1.68
Sox6P40645 Mir6343-201ENSMUST00000183584 84 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm27636-201ENSMUST00000184528 122 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm27818-201ENSMUST00000184536 159 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm29454-201ENSMUST00000190805 393 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Ighv6-2-201ENSMUST00000192430 295 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC4.57□□□□□ -1.68
Sox6P40645 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sox6P40645 Gm44485-201ENSMUST00000199569 137 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm42643-201ENSMUST00000200504 279 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.57□□□□□ -1.68
Sox6P40645 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.57□□□□□ -1.68
Sox6P40645 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.57□□□□□ -1.68
Sox6P40645 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.57□□□□□ -1.68
Sox6P40645 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.57□□□□□ -1.68
Sox6P40645 AC131117.1-201ENSMUST00000225154 1171 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sox6P40645 Gm24706-201ENSMUST00000082806 137 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm23456-201ENSMUST00000083335 137 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Mir338-201ENSMUST00000083666 98 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
Sox6P40645 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sox6P40645 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Sox6P40645 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Sox6P40645 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.57□□□□□ -1.68
Sox6P40645 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sox6P40645 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Sox6P40645 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Sox6P40645 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms