Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Traf1P39428 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Traf1P39428 Gm22468-201ENSMUST00000116680 120 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm26248-201ENSMUST00000116700 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm26137-201ENSMUST00000116701 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm26190-201ENSMUST00000116704 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm24617-201ENSMUST00000116705 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm25778-201ENSMUST00000116713 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm25774-201ENSMUST00000116717 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm22102-201ENSMUST00000116730 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm23177-201ENSMUST00000116784 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm24193-201ENSMUST00000116801 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm24744-201ENSMUST00000116833 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm23879-201ENSMUST00000116874 126 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm24427-201ENSMUST00000116896 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm22346-201ENSMUST00000116918 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm23606-201ENSMUST00000116938 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm22029-201ENSMUST00000116940 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm26298-201ENSMUST00000116956 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm23844-201ENSMUST00000116959 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm24484-201ENSMUST00000117009 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm25347-201ENSMUST00000117026 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm22112-201ENSMUST00000117032 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm14885-201ENSMUST00000117969 496 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm13333-201ENSMUST00000119424 781 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm17081-201ENSMUST00000167363 478 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm6632-201ENSMUST00000168425 954 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC5.87□□□□□ -1.47
Traf1P39428 Gm22991-201ENSMUST00000178126 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm25754-201ENSMUST00000178653 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm22419-201ENSMUST00000178780 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm24802-201ENSMUST00000178897 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm25208-201ENSMUST00000178964 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm24567-201ENSMUST00000179294 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm23943-201ENSMUST00000179712 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm25228-201ENSMUST00000180121 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm9457-201ENSMUST00000180176 372 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm23304-201ENSMUST00000180209 121 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Traf1P39428 Gm17775-201ENSMUST00000198542 258 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm42625-201ENSMUST00000198611 922 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm43418-201ENSMUST00000201334 428 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm8719-201ENSMUST00000203602 534 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm43919-201ENSMUST00000204303 364 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.87□□□□□ -1.47
Traf1P39428 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.87□□□□□ -1.47
Traf1P39428 Supt4b-201ENSMUST00000214434 351 ntBASIC5.87□□□□□ -1.47
Traf1P39428 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.87□□□□□ -1.47
Traf1P39428 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Traf1P39428 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.87□□□□□ -1.47
Traf1P39428 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Traf1P39428 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Traf1P39428 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Traf1P39428 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Traf1P39428 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Traf1P39428 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Traf1P39428 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Traf1P39428 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Traf1P39428 Gm25595-201ENSMUST00000102273 97 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Traf1P39428 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Gm13503-201ENSMUST00000119017 446 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Gm12287-201ENSMUST00000119770 707 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Traf1P39428 Gm26153-201ENSMUST00000157433 127 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Gm25348-201ENSMUST00000158961 111 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Traf1P39428 Gm27688-201ENSMUST00000183634 91 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.86□□□□□ -1.47
Traf1P39428 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Traf1P39428 Gm2497-201ENSMUST00000189539 601 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Gm38166-201ENSMUST00000191660 471 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Gm37070-201ENSMUST00000193272 460 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Traf1P39428 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Traf1P39428 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Traf1P39428 Gm18193-201ENSMUST00000210017 772 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Gm5750-201ENSMUST00000218711 801 ntBASIC5.86□□□□□ -1.47
Traf1P39428 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC5.86□□□□□ -1.47
Traf1P39428 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC5.86□□□□□ -1.47
Traf1P39428 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.86□□□□□ -1.47
Traf1P39428 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Nsa2-203ENSMUST00000225410 974 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Traf1P39428 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Traf1P39428 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Traf1P39428 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Traf1P39428 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Traf1P39428 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Traf1P39428 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.86□□□□□ -1.47
Traf1P39428 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Traf1P39428 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms