Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
P20040 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.36□□□□□ -1.71
P20040 Gm15838-201ENSMUST00000161575 180 ntBASIC4.36□□□□□ -1.71
P20040 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC4.36□□□□□ -1.71
P20040 Gm6075-201ENSMUST00000186816 486 ntBASIC4.36□□□□□ -1.71
P20040 Gm28468-201ENSMUST00000188536 615 ntBASIC4.36□□□□□ -1.71
P20040 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.36□□□□□ -1.71
P20040 Gm5285-201ENSMUST00000193089 666 ntBASIC4.36□□□□□ -1.71
P20040 Gm10048-201ENSMUST00000194196 372 ntBASIC4.36□□□□□ -1.71
P20040 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.36□□□□□ -1.71
P20040 Gm42459-201ENSMUST00000199679 742 ntBASIC4.36□□□□□ -1.71
P20040 Gm43794-201ENSMUST00000200971 692 ntBASIC4.36□□□□□ -1.71
P20040 Gm9038-201ENSMUST00000203400 604 ntBASIC4.36□□□□□ -1.71
P20040 Gm8319-201ENSMUST00000205708 641 ntBASIC4.36□□□□□ -1.71
P20040 Gm20074-201ENSMUST00000208144 484 ntBASIC4.36□□□□□ -1.71
P20040 Gm18871-201ENSMUST00000218655 745 ntBASIC4.36□□□□□ -1.71
P20040 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC4.36□□□□□ -1.71
P20040 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
P20040 Gm6776-201ENSMUST00000057752 900 ntBASIC4.36□□□□□ -1.71
P20040 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
P20040 Gm25260-201ENSMUST00000083053 134 ntBASIC4.36□□□□□ -1.71
P20040 Gm23972-201ENSMUST00000083322 165 ntBASIC4.36□□□□□ -1.71
P20040 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.36□□□□□ -1.71
P20040 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.36□□□□□ -1.71
P20040 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
P20040 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
P20040 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.36□□□□□ -1.71
P20040 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
P20040 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
P20040 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
P20040 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
P20040 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
P20040 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
P20040 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
P20040 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
P20040 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.35□□□□□ -1.71
P20040 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
P20040 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.35□□□□□ -1.71
P20040 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
P20040 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.35□□□□□ -1.71
P20040 Mir676-201ENSMUST00000102443 89 ntBASIC4.35□□□□□ -1.71
P20040 Gm11486-201ENSMUST00000107322 478 ntBASIC4.35□□□□□ -1.71
P20040 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.35□□□□□ -1.71
P20040 Gm15166-201ENSMUST00000120790 385 ntBASIC4.35□□□□□ -1.71
P20040 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.35□□□□□ -1.71
P20040 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
P20040 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
P20040 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
P20040 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.35□□□□□ -1.71
P20040 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC4.35□□□□□ -1.71
P20040 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.35□□□□□ -1.71
P20040 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.35□□□□□ -1.71
P20040 Gm4617-201ENSMUST00000178993 331 ntBASIC4.35□□□□□ -1.71
P20040 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
P20040 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
P20040 Gm8614-201ENSMUST00000182528 978 ntBASIC4.35□□□□□ -1.71
P20040 Gm27355-201ENSMUST00000185045 128 ntBASIC4.35□□□□□ -1.71
P20040 Gm18864-201ENSMUST00000194518 1051 ntBASIC4.35□□□□□ -1.71
P20040 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
P20040 Gm43408-201ENSMUST00000198263 440 ntBASIC4.35□□□□□ -1.71
P20040 Gm2622-201ENSMUST00000200018 471 ntBASIC4.35□□□□□ -1.71
P20040 Gm7825-201ENSMUST00000204046 416 ntBASIC4.35□□□□□ -1.71
P20040 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
P20040 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.35□□□□□ -1.71
P20040 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.35□□□□□ -1.71
P20040 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.35□□□□□ -1.71
P20040 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.35□□□□□ -1.71
P20040 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
P20040 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
P20040 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
P20040 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
P20040 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
P20040 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
P20040 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
P20040 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
P20040 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
P20040 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
P20040 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
P20040 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.35□□□□□ -1.71
P20040 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
P20040 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
P20040 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
P20040 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
P20040 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
P20040 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
P20040 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
P20040 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
P20040 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
P20040 Gm15493-201ENSMUST00000119461 528 ntBASIC4.34□□□□□ -1.71
P20040 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.34□□□□□ -1.71
P20040 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.34□□□□□ -1.71
P20040 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.34□□□□□ -1.71
P20040 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.34□□□□□ -1.71
P20040 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
P20040 Scarna6-201ENSMUST00000158656 265 ntBASIC4.34□□□□□ -1.71
P20040 Gm22529-201ENSMUST00000158817 123 ntBASIC4.34□□□□□ -1.71
P20040 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
P20040 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
P20040 Mir3058-201ENSMUST00000175126 91 ntBASIC4.34□□□□□ -1.71
P20040 Gm27543-201ENSMUST00000183562 177 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms