Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
P06344 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.41□□□□□ -1.7
P06344 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
P06344 Mir879-201ENSMUST00000104703 76 ntBASIC4.41□□□□□ -1.7
P06344 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.41□□□□□ -1.7
P06344 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.41□□□□□ -1.7
P06344 Gm12444-201ENSMUST00000121512 877 ntBASIC4.41□□□□□ -1.7
P06344 Gm24944-201ENSMUST00000158330 128 ntBASIC4.41□□□□□ -1.7
P06344 Gm26404-201ENSMUST00000158498 109 ntBASIC4.41□□□□□ -1.7
P06344 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
P06344 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
P06344 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
P06344 Gm17081-201ENSMUST00000167363 478 ntBASIC4.41□□□□□ -1.7
P06344 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
P06344 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
P06344 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.41□□□□□ -1.7
P06344 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
P06344 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
P06344 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
P06344 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
P06344 Gm18828-202ENSMUST00000181035 310 ntBASIC4.41□□□□□ -1.7
P06344 Gm29588-201ENSMUST00000185738 298 ntBASIC4.41□□□□□ -1.7
P06344 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.41□□□□□ -1.7
P06344 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.41□□□□□ -1.7
P06344 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 Gm37996-201ENSMUST00000191859 367 ntBASIC4.41□□□□□ -1.7
P06344 Gm20056-201ENSMUST00000194813 519 ntBASIC4.41□□□□□ -1.7
P06344 Gm37614-201ENSMUST00000195645 210 ntBASIC4.41□□□□□ -1.7
P06344 Gm43919-201ENSMUST00000204303 364 ntBASIC4.41□□□□□ -1.7
P06344 Gm45072-201ENSMUST00000208673 929 ntBASIC4.41□□□□□ -1.7
P06344 Gm5457-201ENSMUST00000022260 333 ntBASIC4.41□□□□□ -1.7
P06344 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.41□□□□□ -1.7
P06344 AC158388.1-201ENSMUST00000225441 256 ntBASIC4.41□□□□□ -1.7
P06344 AC154527.3-201ENSMUST00000225519 989 ntBASIC4.41□□□□□ -1.7
P06344 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.41□□□□□ -1.7
P06344 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
P06344 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
P06344 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
P06344 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
P06344 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.41□□□□□ -1.7
P06344 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.41□□□□□ -1.7
P06344 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
P06344 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
P06344 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
P06344 AC122408.2-201ENSMUST00000217901 1391 ntBASIC4.4□□□□□ -1.7
P06344 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
P06344 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
P06344 Gm44530-201ENSMUST00000207920 3559 ntBASIC4.4□□□□□ -1.7
P06344 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.4□□□□□ -1.7
P06344 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
P06344 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.4□□□□□ -1.7
P06344 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.4□□□□□ -1.7
P06344 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
P06344 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
P06344 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
P06344 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
P06344 Gm11822-201ENSMUST00000119177 415 ntBASIC4.4□□□□□ -1.71
P06344 Gm12287-201ENSMUST00000119770 707 ntBASIC4.4□□□□□ -1.71
P06344 Gm11866-201ENSMUST00000120209 335 ntBASIC4.4□□□□□ -1.71
P06344 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
P06344 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
P06344 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.4□□□□□ -1.71
P06344 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
P06344 Gm25669-201ENSMUST00000157699 112 ntBASIC4.4□□□□□ -1.71
P06344 Gm3531-201ENSMUST00000162698 489 ntBASIC4.4□□□□□ -1.71
P06344 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.4□□□□□ -1.71
P06344 Gm5777-201ENSMUST00000177265 448 ntBASIC4.4□□□□□ -1.71
P06344 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.4□□□□□ -1.71
P06344 Gm8861-201ENSMUST00000196346 832 ntBASIC4.4□□□□□ -1.71
P06344 Gm8874-201ENSMUST00000196826 286 ntBASIC4.4□□□□□ -1.71
P06344 Gm43315-201ENSMUST00000198120 313 ntBASIC4.4□□□□□ -1.71
P06344 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
P06344 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC4.4□□□□□ -1.71
P06344 Gm18193-201ENSMUST00000210017 772 ntBASIC4.4□□□□□ -1.71
P06344 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.4□□□□□ -1.71
P06344 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.4□□□□□ -1.71
P06344 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.4□□□□□ -1.71
P06344 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.4□□□□□ -1.71
P06344 AC165437.1-201ENSMUST00000228640 536 ntBASIC4.4□□□□□ -1.71
P06344 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
P06344 Gm23302-201ENSMUST00000082710 100 ntBASIC4.4□□□□□ -1.71
P06344 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
P06344 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
P06344 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
P06344 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
P06344 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.4□□□□□ -1.71
P06344 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms