Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.78□□□□□ -1.64
CopeO89079 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.78□□□□□ -1.64
CopeO89079 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.78□□□□□ -1.64
CopeO89079 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.78□□□□□ -1.64
CopeO89079 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.78□□□□□ -1.64
CopeO89079 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CopeO89079 Gm11822-201ENSMUST00000119177 415 ntBASIC4.78□□□□□ -1.64
CopeO89079 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.78□□□□□ -1.64
CopeO89079 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.78□□□□□ -1.64
CopeO89079 Gm24383-201ENSMUST00000122691 333 ntBASIC4.78□□□□□ -1.64
CopeO89079 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.78□□□□□ -1.64
CopeO89079 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.78□□□□□ -1.64
CopeO89079 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CopeO89079 Mir7012-201ENSMUST00000183900 64 ntBASIC4.78□□□□□ -1.64
CopeO89079 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
CopeO89079 Gm28830-201ENSMUST00000188192 213 ntBASIC4.78□□□□□ -1.64
CopeO89079 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CopeO89079 Gm37881-201ENSMUST00000193001 421 ntBASIC4.78□□□□□ -1.64
CopeO89079 Gm37095-201ENSMUST00000195421 205 ntBASIC4.78□□□□□ -1.64
CopeO89079 Gm43382-201ENSMUST00000198954 838 ntBASIC4.78□□□□□ -1.64
CopeO89079 Gm43136-201ENSMUST00000200403 636 ntBASIC4.78□□□□□ -1.64
CopeO89079 Gm19596-201ENSMUST00000203685 739 ntBASIC4.78□□□□□ -1.64
CopeO89079 Gm45157-201ENSMUST00000208729 401 ntBASIC4.78□□□□□ -1.64
CopeO89079 Gm33601-201ENSMUST00000210001 961 ntBASIC4.78□□□□□ -1.64
CopeO89079 Gm7439-201ENSMUST00000214053 835 ntBASIC4.78□□□□□ -1.64
CopeO89079 CT025598.1-201ENSMUST00000225140 427 ntBASIC4.78□□□□□ -1.64
CopeO89079 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.78□□□□□ -1.64
CopeO89079 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.78□□□□□ -1.64
CopeO89079 Rybp-ps-201ENSMUST00000069489 681 ntBASIC4.78□□□□□ -1.64
CopeO89079 Gm23330-201ENSMUST00000082660 164 ntBASIC4.78□□□□□ -1.64
CopeO89079 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
CopeO89079 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CopeO89079 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
CopeO89079 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CopeO89079 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CopeO89079 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CopeO89079 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CopeO89079 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CopeO89079 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CopeO89079 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CopeO89079 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CopeO89079 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CopeO89079 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CopeO89079 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CopeO89079 Gm11971-201ENSMUST00000117715 288 ntBASIC4.77□□□□□ -1.65
CopeO89079 Gm14930-201ENSMUST00000118864 652 ntBASIC4.77□□□□□ -1.65
CopeO89079 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CopeO89079 Gm15493-201ENSMUST00000119461 528 ntBASIC4.77□□□□□ -1.65
CopeO89079 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CopeO89079 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CopeO89079 Gm24860-201ENSMUST00000158457 276 ntBASIC4.77□□□□□ -1.65
CopeO89079 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.77□□□□□ -1.65
CopeO89079 Mrgprb13-201ENSMUST00000188191 985 ntBASIC4.77□□□□□ -1.65
CopeO89079 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.77□□□□□ -1.65
CopeO89079 Gm29793-201ENSMUST00000202874 460 ntBASIC4.77□□□□□ -1.65
CopeO89079 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.77□□□□□ -1.65
CopeO89079 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.77□□□□□ -1.65
CopeO89079 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CopeO89079 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.77□□□□□ -1.65
CopeO89079 AL671874.1-201ENSMUST00000223746 1123 ntBASIC4.77□□□□□ -1.65
CopeO89079 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CopeO89079 Gm25187-201ENSMUST00000083906 133 ntBASIC4.77□□□□□ -1.65
CopeO89079 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
CopeO89079 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CopeO89079 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CopeO89079 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
CopeO89079 Gm8822-201ENSMUST00000118948 2347 ntBASIC4.77□□□□□ -1.65
CopeO89079 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.76□□□□□ -1.65
CopeO89079 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CopeO89079 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CopeO89079 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.76□□□□□ -1.65
CopeO89079 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CopeO89079 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CopeO89079 Gm22273-201ENSMUST00000104040 132 ntBASIC4.76□□□□□ -1.65
CopeO89079 Gm14603-201ENSMUST00000121275 448 ntBASIC4.76□□□□□ -1.65
CopeO89079 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.76□□□□□ -1.65
CopeO89079 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CopeO89079 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.76□□□□□ -1.65
CopeO89079 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CopeO89079 Gm22968-201ENSMUST00000157955 118 ntBASIC4.76□□□□□ -1.65
CopeO89079 Gm24675-201ENSMUST00000158757 259 ntBASIC4.76□□□□□ -1.65
CopeO89079 Gm22116-201ENSMUST00000158791 141 ntBASIC4.76□□□□□ -1.65
CopeO89079 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CopeO89079 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CopeO89079 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CopeO89079 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CopeO89079 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CopeO89079 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.76□□□□□ -1.65
CopeO89079 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.76□□□□□ -1.65
CopeO89079 Gm27960-201ENSMUST00000183445 184 ntBASIC4.76□□□□□ -1.65
CopeO89079 Gm28769-201ENSMUST00000190176 615 ntBASIC4.76□□□□□ -1.65
CopeO89079 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.76□□□□□ -1.65
CopeO89079 Gm44431-201ENSMUST00000203500 413 ntBASIC4.76□□□□□ -1.65
CopeO89079 Gm44402-201ENSMUST00000203677 238 ntBASIC4.76□□□□□ -1.65
CopeO89079 Gm2011-203ENSMUST00000203750 435 ntBASIC4.76□□□□□ -1.65
CopeO89079 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.76□□□□□ -1.65
CopeO89079 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.76□□□□□ -1.65
CopeO89079 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.76□□□□□ -1.65
CopeO89079 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.76□□□□□ -1.65
CopeO89079 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms