Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm6361-201ENSMUST00000091031 435 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 BC055308-201ENSMUST00000193380 2538 ntBASIC3.84□□□□□ -1.8
Hmgb3O54879 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Hmgb3O54879 Gm43528-201ENSMUST00000199492 1674 ntBASIC3.84□□□□□ -1.8
Hmgb3O54879 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Hmgb3O54879 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hmgb3O54879 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Hmgb3O54879 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm13579-201ENSMUST00000118519 517 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm11790-201ENSMUST00000119569 455 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hmgb3O54879 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hmgb3O54879 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm6055-201ENSMUST00000180532 378 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hmgb3O54879 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm7496-201ENSMUST00000192573 1034 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm18306-201ENSMUST00000207338 569 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm44571-201ENSMUST00000208092 533 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC3.83□□□□□ -1.8
Hmgb3O54879 AC154296.3-201ENSMUST00000214427 712 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm21041-201ENSMUST00000214829 823 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hmgb3O54879 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC3.83□□□□□ -1.8
Hmgb3O54879 AC123064.1-201ENSMUST00000218950 406 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm3086-202ENSMUST00000221248 310 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm4822-201ENSMUST00000077551 479 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm8724-201ENSMUST00000081668 483 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Hmgb3O54879 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Hmgb3O54879 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm37749-201ENSMUST00000193917 1899 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 Gm13712-201ENSMUST00000117484 2295 ntBASIC3.83□□□□□ -1.8
Hmgb3O54879 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hmgb3O54879 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm43313-201ENSMUST00000201398 2235 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Hmgb3O54879 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Hmgb3O54879 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm14995-201ENSMUST00000117135 391 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm12062-201ENSMUST00000117533 259 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm12379-201ENSMUST00000119607 391 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm23669-201ENSMUST00000157470 128 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm22210-201ENSMUST00000158101 144 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm6808-201ENSMUST00000162341 807 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm9457-201ENSMUST00000180176 372 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm2497-201ENSMUST00000189539 601 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC3.82□□□□□ -1.8
Hmgb3O54879 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm37973-201ENSMUST00000195767 1289 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm4574-201ENSMUST00000207804 542 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm19201-201ENSMUST00000210127 778 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Ear-ps9-202ENSMUST00000226796 245 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 AC116596.2-203ENSMUST00000227345 731 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 AC160120.1-201ENSMUST00000227446 663 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm6065-201ENSMUST00000081336 492 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Hmgb3O54879 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm42436-201ENSMUST00000198804 3656 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Hmgb3O54879 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm37115-201ENSMUST00000193750 2849 ntBASIC3.82□□□□□ -1.8
Hmgb3O54879 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Hmgb3O54879 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Hmgb3O54879 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Hmgb3O54879 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms