Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cx3cl1O35188 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm25096-201ENSMUST00000104043 129 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm24160-201ENSMUST00000104594 126 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Mir879-201ENSMUST00000104703 76 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm15297-201ENSMUST00000117795 290 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm15766-201ENSMUST00000118025 813 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm16259-201ENSMUST00000145241 553 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm23318-201ENSMUST00000158000 108 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm43084-201ENSMUST00000200696 947 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm3086-202ENSMUST00000221248 310 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm24166-201ENSMUST00000082724 135 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cx3cl1O35188 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC4.53□□□□□ -1.69
Cx3cl1O35188 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.53□□□□□ -1.69
Cx3cl1O35188 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.53□□□□□ -1.69
Cx3cl1O35188 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Gm16089-201ENSMUST00000117679 336 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Gm12717-201ENSMUST00000118427 983 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Gm11631-201ENSMUST00000119220 156 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Gm13867-201ENSMUST00000120844 395 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Gm12444-201ENSMUST00000121512 877 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Mir3058-201ENSMUST00000175126 91 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Gm19936-201ENSMUST00000216414 838 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Gm19189-201ENSMUST00000221689 754 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cx3cl1O35188 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.52□□□□□ -1.69
Cx3cl1O35188 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Cx3cl1O35188 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Cx3cl1O35188 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Cx3cl1O35188 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.51□□□□□ -1.69
Cx3cl1O35188 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cx3cl1O35188 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cx3cl1O35188 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.51□□□□□ -1.69
Cx3cl1O35188 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cx3cl1O35188 Gm22194-201ENSMUST00000116869 95 ntBASIC4.51□□□□□ -1.69
Cx3cl1O35188 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cx3cl1O35188 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Cx3cl1O35188 Gm14587-201ENSMUST00000121714 658 ntBASIC4.51□□□□□ -1.69
Cx3cl1O35188 Gm25103-201ENSMUST00000122671 318 ntBASIC4.51□□□□□ -1.69
Cx3cl1O35188 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cx3cl1O35188 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC4.51□□□□□ -1.69
Cx3cl1O35188 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Cx3cl1O35188 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cx3cl1O35188 Gm27039-201ENSMUST00000182438 962 ntBASIC4.51□□□□□ -1.69
Cx3cl1O35188 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cx3cl1O35188 Gm5058-201ENSMUST00000187331 463 ntBASIC4.51□□□□□ -1.69
Cx3cl1O35188 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cx3cl1O35188 Gm36986-201ENSMUST00000195320 353 ntBASIC4.51□□□□□ -1.69
Cx3cl1O35188 Gm8891-201ENSMUST00000198546 832 ntBASIC4.51□□□□□ -1.69
Cx3cl1O35188 Gm43631-201ENSMUST00000202011 369 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms