Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm23537-201ENSMUST00000157536 330 ntBASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm22646-201ENSMUST00000175130 115 ntBASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm21756-201ENSMUST00000178380 930 ntBASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm21405-201ENSMUST00000179024 930 ntBASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm21191-201ENSMUST00000186484 930 ntBASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm29503-201ENSMUST00000191044 930 ntBASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm20239-201ENSMUST00000196610 982 ntBASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm45422-201ENSMUST00000211476 246 ntBASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm45710-201ENSMUST00000212847 215 ntBASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm23514-201ENSMUST00000082827 130 ntBASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Vps28Q9D1C8 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm14985-201ENSMUST00000118693 786 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm14175-201ENSMUST00000119835 241 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm15034-201ENSMUST00000120043 349 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm13788-201ENSMUST00000120767 601 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm24002-201ENSMUST00000158456 104 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm23179-201ENSMUST00000158693 304 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm17044-201ENSMUST00000168549 828 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm18560-201ENSMUST00000173463 1123 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm27355-201ENSMUST00000185045 128 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm29534-201ENSMUST00000187328 382 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm29475-201ENSMUST00000190767 312 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm17981-201ENSMUST00000191109 739 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm42593-201ENSMUST00000198469 377 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm18660-201ENSMUST00000199542 629 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm18487-201ENSMUST00000215826 878 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 AC167202.1-201ENSMUST00000219027 331 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm20368-201ENSMUST00000220716 301 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm46996-201ENSMUST00000220924 408 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm24706-201ENSMUST00000082806 137 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Mir31-201ENSMUST00000083474 106 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
Vps28Q9D1C8 Gm3089-201ENSMUST00000200804 1395 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm3302-201ENSMUST00000201462 1395 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms