Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 CT025538.2-201ENSMUST00000226083 772 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm22578-201ENSMUST00000083730 107 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm17165-201ENSMUST00000096155 493 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ddx56Q9D0R4 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Ddx56Q9D0R4 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Ddx56Q9D0R4 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.9□□□□□ -1.47
Ddx56Q9D0R4 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.9□□□□□ -1.47
Ddx56Q9D0R4 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Ddx56Q9D0R4 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.9□□□□□ -1.47
Ddx56Q9D0R4 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ddx56Q9D0R4 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ddx56Q9D0R4 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Ddx56Q9D0R4 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Ddx56Q9D0R4 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm7739-201ENSMUST00000221131 1560 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm24886-201ENSMUST00000104384 123 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm22709-201ENSMUST00000116893 111 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm12584-201ENSMUST00000117109 1105 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm14932-201ENSMUST00000117112 453 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm15110-201ENSMUST00000117545 881 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm11843-201ENSMUST00000118984 425 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm13013-201ENSMUST00000119087 523 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm15493-201ENSMUST00000119461 528 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm8051-201ENSMUST00000120464 466 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm14463-201ENSMUST00000121117 498 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm24731-201ENSMUST00000158227 131 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm24768-201ENSMUST00000158512 94 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Mir6411-201ENSMUST00000183556 108 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm4322-201ENSMUST00000191094 336 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm37578-201ENSMUST00000192256 1177 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm37418-201ENSMUST00000195031 274 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm37235-201ENSMUST00000195171 59 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm38154-201ENSMUST00000195444 340 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms