Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Gm11366-201ENSMUST00000119279 429 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Gm13924-201ENSMUST00000119899 486 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Gm14725-201ENSMUST00000120324 828 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Gm14369-201ENSMUST00000121355 285 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Gm23897-201ENSMUST00000158110 158 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Gm26354-201ENSMUST00000158221 129 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Gm26925-201ENSMUST00000182470 957 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Gm28094-201ENSMUST00000185262 390 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Gm28803-201ENSMUST00000190385 764 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Gm42579-201ENSMUST00000200512 734 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 CT030194.2-201ENSMUST00000225752 379 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Olfr1153-201ENSMUST00000052300 957 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Smc1aQ9CU62 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm22266-201ENSMUST00000104011 138 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm24235-201ENSMUST00000104319 129 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm24855-201ENSMUST00000104848 97 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm16128-201ENSMUST00000117855 626 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm12638-201ENSMUST00000119531 298 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm21909-201ENSMUST00000178260 439 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm42694-201ENSMUST00000196951 358 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Smc1aQ9CU62 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm25418-201ENSMUST00000104214 129 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms