Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm23750-201ENSMUST00000104222 132 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm22818-201ENSMUST00000157446 104 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Mir7687-201ENSMUST00000184722 59 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm38279-201ENSMUST00000194067 1131 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm9317-201ENSMUST00000197055 862 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm45189-201ENSMUST00000208567 363 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Msh4Q99MT2 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm5457-201ENSMUST00000022260 333 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm7768-201ENSMUST00000222988 597 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msh4Q99MT2 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm6369-201ENSMUST00000069626 412 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm24319-201ENSMUST00000083389 107 ntBASIC5.17□□□□□ -1.58
Msh4Q99MT2 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Msh4Q99MT2 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm25919-201ENSMUST00000104271 132 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm15754-201ENSMUST00000119191 478 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm9435-201ENSMUST00000120379 877 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm5383-201ENSMUST00000121177 617 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm25906-201ENSMUST00000158489 126 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm15812-201ENSMUST00000162331 748 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm10087-201ENSMUST00000167650 330 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Msh4Q99MT2 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Mir6412-201ENSMUST00000184477 97 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Mir7087-201ENSMUST00000184840 70 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm27781-201ENSMUST00000185185 92 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm28429-201ENSMUST00000188521 363 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm21803-201ENSMUST00000188897 693 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm28567-201ENSMUST00000190270 693 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm37044-201ENSMUST00000193531 693 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm38369-201ENSMUST00000195101 693 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm18340-201ENSMUST00000196342 609 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm43315-201ENSMUST00000198120 313 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm19761-201ENSMUST00000205372 391 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.16□□□□□ -1.58
Msh4Q99MT2 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Msh4Q99MT2 Gm18541-201ENSMUST00000215935 538 ntBASIC5.16□□□□□ -1.58
Msh4Q99MT2 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 301.5 ms