Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 AC131743.1-201ENSMUST00000222138 4024 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm12062-201ENSMUST00000117533 259 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm14836-201ENSMUST00000118567 471 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm11448-201ENSMUST00000120427 450 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Mir1963-201ENSMUST00000158594 59 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm15795-201ENSMUST00000160969 553 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm22859-201ENSMUST00000174978 122 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm37881-201ENSMUST00000193001 421 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm44816-201ENSMUST00000206666 477 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 AC123832.2-201ENSMUST00000215151 129 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 AC164116.1-201ENSMUST00000225810 622 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm23300-201ENSMUST00000082712 125 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm25140-201ENSMUST00000083254 140 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Mir215-201ENSMUST00000083628 112 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 n-R5s152-201ENSMUST00000093641 119 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm9386-201ENSMUST00000095195 381 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm37329-201ENSMUST00000192973 2057 ntBASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nup35Q8R4R6 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm44822-201ENSMUST00000208559 6389 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm8595-201ENSMUST00000118250 630 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm11255-201ENSMUST00000120448 1180 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm24236-201ENSMUST00000157794 134 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm25447-201ENSMUST00000158997 128 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm16107-201ENSMUST00000162523 862 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm3145-201ENSMUST00000188584 220 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm42990-201ENSMUST00000199231 312 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm45777-201ENSMUST00000213009 301 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 AC127242.4-201ENSMUST00000221242 470 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 AC165283.1-201ENSMUST00000223390 307 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 AC165260.3-201ENSMUST00000225101 665 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Nsa2-203ENSMUST00000225410 974 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm26163-201ENSMUST00000083792 178 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Gm28362-201ENSMUST00000189430 2420 ntBASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nup35Q8R4R6 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Nup35Q8R4R6 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Nup35Q8R4R6 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Nup35Q8R4R6 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Nup35Q8R4R6 Gm14667-201ENSMUST00000119448 1350 ntBASIC3.78□□□□□ -1.8
Nup35Q8R4R6 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Nup35Q8R4R6 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Nup35Q8R4R6 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms