Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm16016-201ENSMUST00000120831 550 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm15335-201ENSMUST00000122442 411 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm23430-201ENSMUST00000122490 314 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm23885-201ENSMUST00000122682 294 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm23279-201ENSMUST00000157912 97 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm23149-201ENSMUST00000158837 230 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm22650-201ENSMUST00000175138 105 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm22932-201ENSMUST00000175510 72 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm16531-201ENSMUST00000180658 967 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm1972-201ENSMUST00000181606 964 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Mir6952-201ENSMUST00000185092 61 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm18185-201ENSMUST00000186725 667 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Igkv12-49-201ENSMUST00000197714 278 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Mir142-201ENSMUST00000198092 64 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm19900-201ENSMUST00000207285 576 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 AC153852.1-201ENSMUST00000217881 567 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 AC157017.1-201ENSMUST00000220148 364 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 AC124433.2-201ENSMUST00000223867 291 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Mir325-201ENSMUST00000083491 98 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm45872-201ENSMUST00000209804 1584 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm45577-201ENSMUST00000210206 2287 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Clrn1Q8K445 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Clrn1Q8K445 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm22499-201ENSMUST00000104501 135 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm11821-201ENSMUST00000117335 979 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm13728-201ENSMUST00000117471 400 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm13428-201ENSMUST00000117540 365 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm15660-201ENSMUST00000118997 478 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm11876-201ENSMUST00000120002 269 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm22492-201ENSMUST00000157192 297 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm24065-201ENSMUST00000157487 264 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm24435-201ENSMUST00000157886 110 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm22519-201ENSMUST00000158270 178 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm26271-201ENSMUST00000158349 104 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm3111-201ENSMUST00000167426 490 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm31230-201ENSMUST00000199725 785 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm2961-201ENSMUST00000211074 772 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC5.44□□□□□ -1.54
Clrn1Q8K445 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Clrn1Q8K445 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.44□□□□□ -1.54
Clrn1Q8K445 CT009515.3-201ENSMUST00000226509 671 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms