Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.2□□□□□ -1.58
Prpf39Q8K2Z2 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.2□□□□□ -1.58
Prpf39Q8K2Z2 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Prpf39Q8K2Z2 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Prpf39Q8K2Z2 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.2□□□□□ -1.58
Prpf39Q8K2Z2 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Prpf39Q8K2Z2 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Prpf39Q8K2Z2 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Prpf39Q8K2Z2 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm25419-201ENSMUST00000104215 191 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm15185-201ENSMUST00000117397 746 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm14520-201ENSMUST00000119258 387 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm11790-201ENSMUST00000119569 455 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm13484-201ENSMUST00000120738 412 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm7973-201ENSMUST00000122107 488 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm23537-201ENSMUST00000157536 330 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm22600-201ENSMUST00000157598 269 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm24944-201ENSMUST00000158330 128 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm17044-201ENSMUST00000168549 828 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm19206-201ENSMUST00000186401 827 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm42428-201ENSMUST00000198677 302 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm8999-201ENSMUST00000204951 969 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm18007-201ENSMUST00000205019 844 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm44869-201ENSMUST00000208836 357 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf39Q8K2Z2 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm18491-201ENSMUST00000192492 1594 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm24371-201ENSMUST00000122662 267 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Mir6416-201ENSMUST00000183664 117 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm9569-201ENSMUST00000187492 787 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm37934-201ENSMUST00000192902 402 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm5842-201ENSMUST00000195073 622 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm19617-201ENSMUST00000202977 308 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm7825-201ENSMUST00000204046 416 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm44795-201ENSMUST00000205496 319 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm9512-201ENSMUST00000223112 497 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm5045-201ENSMUST00000027054 810 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Prpf39Q8K2Z2 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms