Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Ccdc28aQ8CEI3 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm11550-201ENSMUST00000118210 699 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm12244-201ENSMUST00000119500 291 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm9208-201ENSMUST00000120468 948 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm14876-201ENSMUST00000120795 327 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm24383-201ENSMUST00000122691 333 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm33601-201ENSMUST00000210001 961 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm7439-201ENSMUST00000214053 835 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm18904-201ENSMUST00000218756 329 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Rybp-ps-201ENSMUST00000069489 681 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm23330-201ENSMUST00000082660 164 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm37311-201ENSMUST00000195541 2024 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm4991-201ENSMUST00000118899 1552 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc28aQ8CEI3 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm11822-201ENSMUST00000119177 415 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm14603-201ENSMUST00000121275 448 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm23673-201ENSMUST00000157474 298 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Mir7222-201ENSMUST00000183740 75 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Mir7012-201ENSMUST00000183900 64 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm18558-201ENSMUST00000186253 1214 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm37636-201ENSMUST00000193583 359 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm43382-201ENSMUST00000198954 838 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm43136-201ENSMUST00000200403 636 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm42643-201ENSMUST00000200504 279 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm29793-201ENSMUST00000202874 460 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm2011-203ENSMUST00000203750 435 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 AL671874.1-201ENSMUST00000223746 1123 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 CT025598.1-201ENSMUST00000225140 427 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 AV026068-231ENSMUST00000225862 482 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms