Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm16038-201ENSMUST00000159317 193 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm22702-201ENSMUST00000175372 69 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm26177-201ENSMUST00000178683 107 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm18505-201ENSMUST00000187360 790 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm38008-201ENSMUST00000195333 518 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm6077-201ENSMUST00000196008 499 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm17737-201ENSMUST00000210183 1147 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm35262-201ENSMUST00000215133 267 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 AL606513.1-201ENSMUST00000225369 579 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 AC154592.1-201ENSMUST00000225784 574 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm23627-201ENSMUST00000082459 107 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm22502-201ENSMUST00000082488 107 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm24149-201ENSMUST00000082757 107 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm4017-201ENSMUST00000084813 338 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm16261-201ENSMUST00000096813 205 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm6166-201ENSMUST00000098689 409 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb7Q8CDY9 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.71□□□□□ -1.33
Pcdhb7Q8CDY9 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdhb7Q8CDY9 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.71□□□□□ -1.33
Pcdhb7Q8CDY9 Gm15101-201ENSMUST00000178818 1502 ntBASIC6.71□□□□□ -1.33
Pcdhb7Q8CDY9 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdhb7Q8CDY9 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Pcdhb7Q8CDY9 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Pcdhb7Q8CDY9 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Pcdhb7Q8CDY9 Gm42955-201ENSMUST00000197355 3393 ntBASIC6.71□□□□□ -1.33
Pcdhb7Q8CDY9 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm14865-201ENSMUST00000117523 494 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm14529-201ENSMUST00000117894 406 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm12543-201ENSMUST00000120410 543 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm12804-201ENSMUST00000121030 999 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm2986-201ENSMUST00000121603 382 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm7846-201ENSMUST00000145844 274 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm25722-201ENSMUST00000157498 279 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm2092-201ENSMUST00000178887 639 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm2759-201ENSMUST00000179938 639 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm25412-201ENSMUST00000180258 107 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm29201-201ENSMUST00000189120 431 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Trav5d-2-201ENSMUST00000196107 275 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Trav5n-2-201ENSMUST00000197136 275 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm8182-201ENSMUST00000197863 769 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm45023-201ENSMUST00000207951 379 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm24610-201ENSMUST00000083270 109 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm24764-201ENSMUST00000083686 199 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pcdhb7Q8CDY9 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms