Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Neat1-201ENSMUST00000173672 20771 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm23274-201ENSMUST00000104056 130 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm7206-201ENSMUST00000117730 508 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm11409-201ENSMUST00000118621 403 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 H3f3c-201ENSMUST00000119459 411 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm15828-201ENSMUST00000119911 522 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm6027-201ENSMUST00000121467 756 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm37490-201ENSMUST00000195566 724 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm37908-201ENSMUST00000195828 470 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm43596-201ENSMUST00000202818 884 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm44281-201ENSMUST00000203090 166 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm20997-201ENSMUST00000205148 231 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm44776-201ENSMUST00000207212 381 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm18997-201ENSMUST00000216353 822 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 CT954323.2-201ENSMUST00000222056 213 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 AC158142.3-201ENSMUST00000226230 675 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm25139-201ENSMUST00000083247 210 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm22741-201ENSMUST00000083438 165 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Lrif1Q8CDD9 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm12760-201ENSMUST00000117861 482 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm14046-201ENSMUST00000119389 509 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm12685-201ENSMUST00000121702 214 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm15227-201ENSMUST00000121844 399 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm11507-201ENSMUST00000156462 412 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Mir6400-201ENSMUST00000184870 92 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm27355-201ENSMUST00000185045 128 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm18802-201ENSMUST00000186270 888 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm6075-201ENSMUST00000186816 486 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm28061-201ENSMUST00000189085 807 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm36998-201ENSMUST00000193205 704 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm37070-201ENSMUST00000193272 460 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm44184-201ENSMUST00000204290 132 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm18899-201ENSMUST00000217663 546 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm6171-201ENSMUST00000220760 645 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 AC132433.1-201ENSMUST00000221553 1101 ntBASIC4.82□□□□□ -1.64
Lrif1Q8CDD9 AC131100.2-201ENSMUST00000227701 998 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms