Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm14303-201ENSMUST00000121320 171 ntBASIC6.66□□□□□ -1.34
Usp47Q8BY87 Gm22789-201ENSMUST00000157884 130 ntBASIC6.66□□□□□ -1.34
Usp47Q8BY87 Gm4134-201ENSMUST00000173244 563 ntBASIC6.66□□□□□ -1.34
Usp47Q8BY87 Gm22177-201ENSMUST00000175002 158 ntBASIC6.66□□□□□ -1.34
Usp47Q8BY87 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Usp47Q8BY87 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Usp47Q8BY87 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Usp47Q8BY87 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
Usp47Q8BY87 Gm37964-201ENSMUST00000192459 4905 ntBASIC6.65□□□□□ -1.34
Usp47Q8BY87 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
Usp47Q8BY87 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp47Q8BY87 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp47Q8BY87 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp47Q8BY87 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Usp47Q8BY87 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Usp47Q8BY87 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Usp47Q8BY87 Gm15779-201ENSMUST00000117470 412 ntBASIC6.65□□□□□ -1.35
Usp47Q8BY87 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC6.65□□□□□ -1.35
Usp47Q8BY87 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC6.65□□□□□ -1.35
Usp47Q8BY87 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC6.65□□□□□ -1.35
Usp47Q8BY87 Gm16114-201ENSMUST00000161930 300 ntBASIC6.65□□□□□ -1.35
Usp47Q8BY87 Mir6933-201ENSMUST00000184982 81 ntBASIC6.65□□□□□ -1.35
Usp47Q8BY87 AC154296.3-201ENSMUST00000214427 712 ntBASIC6.65□□□□□ -1.35
Usp47Q8BY87 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Usp47Q8BY87 Gm43888-201ENSMUST00000204405 2587 ntBASIC6.65□□□□□ -1.35
Usp47Q8BY87 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Usp47Q8BY87 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Usp47Q8BY87 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Usp47Q8BY87 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Usp47Q8BY87 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.35
Usp47Q8BY87 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Usp47Q8BY87 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
Usp47Q8BY87 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Usp47Q8BY87 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm11251-201ENSMUST00000119593 2800 ntBASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm11584-201ENSMUST00000120636 325 ntBASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm13220-201ENSMUST00000121535 508 ntBASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Dlx6os1-204ENSMUST00000184182 146 ntBASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm38221-201ENSMUST00000195146 365 ntBASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm44474-201ENSMUST00000196525 127 ntBASIC6.64□□□□□ -1.35
Usp47Q8BY87 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm8911-201ENSMUST00000213986 652 ntBASIC6.64□□□□□ -1.35
Usp47Q8BY87 AC113031.3-201ENSMUST00000226552 190 ntBASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm6065-201ENSMUST00000081336 492 ntBASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm6043-201ENSMUST00000099961 492 ntBASIC6.64□□□□□ -1.35
Usp47Q8BY87 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm42494-201ENSMUST00000196515 3051 ntBASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gm43386-201ENSMUST00000199654 4001 ntBASIC6.64□□□□□ -1.35
Usp47Q8BY87 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Usp47Q8BY87 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Usp47Q8BY87 Gm15752-201ENSMUST00000117427 394 ntBASIC6.63□□□□□ -1.35
Usp47Q8BY87 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC6.63□□□□□ -1.35
Usp47Q8BY87 Gm14369-201ENSMUST00000121355 285 ntBASIC6.63□□□□□ -1.35
Usp47Q8BY87 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC6.63□□□□□ -1.35
Usp47Q8BY87 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Usp47Q8BY87 Mir7074-201ENSMUST00000183884 63 ntBASIC6.63□□□□□ -1.35
Usp47Q8BY87 Gm37123-201ENSMUST00000192994 1171 ntBASIC6.63□□□□□ -1.35
Usp47Q8BY87 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC6.63□□□□□ -1.35
Usp47Q8BY87 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Usp47Q8BY87 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC6.63□□□□□ -1.35
Usp47Q8BY87 Gm6366-201ENSMUST00000198766 826 ntBASIC6.63□□□□□ -1.35
Usp47Q8BY87 Gm17956-201ENSMUST00000199931 838 ntBASIC6.63□□□□□ -1.35
Usp47Q8BY87 Gm18442-201ENSMUST00000220925 639 ntBASIC6.63□□□□□ -1.35
Usp47Q8BY87 Gm3338-201ENSMUST00000220982 269 ntBASIC6.63□□□□□ -1.35
Usp47Q8BY87 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.63□□□□□ -1.35
Usp47Q8BY87 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Usp47Q8BY87 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Usp47Q8BY87 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Usp47Q8BY87 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Usp47Q8BY87 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Usp47Q8BY87 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.63□□□□□ -1.35
Usp47Q8BY87 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm15333-201ENSMUST00000118825 364 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm13808-201ENSMUST00000121353 184 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm24444-201ENSMUST00000157244 308 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm26085-201ENSMUST00000157900 116 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms