Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp40Q8BWR4 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Usp40Q8BWR4 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Usp40Q8BWR4 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp40Q8BWR4 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp40Q8BWR4 Gm42725-201ENSMUST00000199296 4193 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm37769-201ENSMUST00000193753 2369 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm12641-201ENSMUST00000117874 985 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm15385-201ENSMUST00000118725 667 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm11404-201ENSMUST00000120872 494 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm13077-201ENSMUST00000121941 484 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm24724-201ENSMUST00000158230 107 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Olfr331-202ENSMUST00000170501 957 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm9457-201ENSMUST00000180176 372 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 AC121947.1-201ENSMUST00000221755 1145 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 AC211878.2-201ENSMUST00000222486 488 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Usp40Q8BWR4 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm43606-201ENSMUST00000195938 3556 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm37717-201ENSMUST00000192647 3027 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm42508-201ENSMUST00000199972 3292 ntBASIC7.3□□□□□ -1.24
Usp40Q8BWR4 Gm43395-201ENSMUST00000198717 2240 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm15176-201ENSMUST00000117734 135 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm12007-201ENSMUST00000120978 597 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm13131-201ENSMUST00000122228 321 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm15740-201ENSMUST00000159703 1292 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm2617-201ENSMUST00000185690 1066 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm18357-201ENSMUST00000188184 580 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm18747-201ENSMUST00000198129 648 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm43090-201ENSMUST00000202459 314 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm44118-201ENSMUST00000204665 229 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm6261-201ENSMUST00000204707 760 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm32526-201ENSMUST00000221878 981 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 AC154239.1-201ENSMUST00000228565 406 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm18757-201ENSMUST00000207938 3141 ntBASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Usp40Q8BWR4 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Usp40Q8BWR4 Gm37079-201ENSMUST00000194114 2135 ntBASIC7.28□□□□□ -1.24
Usp40Q8BWR4 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Usp40Q8BWR4 Gm10997-201ENSMUST00000210294 1500 ntBASIC7.28□□□□□ -1.24
Usp40Q8BWR4 AC162908.1-201ENSMUST00000219164 4563 ntBASIC7.28□□□□□ -1.24
Usp40Q8BWR4 Gm37018-201ENSMUST00000192441 3869 ntBASIC7.28□□□□□ -1.24
Usp40Q8BWR4 Gm18163-201ENSMUST00000197877 1643 ntBASIC7.28□□□□□ -1.24
Usp40Q8BWR4 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Usp40Q8BWR4 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Usp40Q8BWR4 Gm24789-201ENSMUST00000104282 131 ntBASIC7.28□□□□□ -1.24
Usp40Q8BWR4 Gm24160-201ENSMUST00000104594 126 ntBASIC7.28□□□□□ -1.24
Usp40Q8BWR4 Gm11911-201ENSMUST00000117938 1023 ntBASIC7.28□□□□□ -1.24
Usp40Q8BWR4 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Usp40Q8BWR4 Mup-ps13-201ENSMUST00000120662 545 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms