Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.04□□□□□ -1.6
Nup54Q8BTS4 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm22194-201ENSMUST00000116869 95 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm12245-201ENSMUST00000117266 357 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm12285-201ENSMUST00000117347 233 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm15185-201ENSMUST00000117397 746 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm16089-201ENSMUST00000117679 336 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm15297-201ENSMUST00000117795 290 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm11313-201ENSMUST00000118779 432 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm13532-201ENSMUST00000120373 240 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm23318-201ENSMUST00000158000 108 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm24931-201ENSMUST00000158324 107 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm18828-202ENSMUST00000181035 310 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm43631-201ENSMUST00000202011 369 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm45789-201ENSMUST00000213038 364 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm18997-201ENSMUST00000216353 822 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm3213-201ENSMUST00000219296 441 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm18363-201ENSMUST00000221671 730 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm19189-201ENSMUST00000221689 754 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 AC154562.1-201ENSMUST00000226140 966 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Nup54Q8BTS4 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm9427-201ENSMUST00000116187 651 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm12717-201ENSMUST00000118427 983 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm13867-201ENSMUST00000120844 395 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm13487-201ENSMUST00000122240 864 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm3757-201ENSMUST00000125878 675 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm23897-201ENSMUST00000158110 158 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm23855-201ENSMUST00000158377 135 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm25048-201ENSMUST00000158598 91 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm26993-201ENSMUST00000182766 789 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm36986-201ENSMUST00000195320 353 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm8891-201ENSMUST00000198546 832 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm43717-201ENSMUST00000198684 310 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm45157-201ENSMUST00000208729 401 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 CT030194.2-201ENSMUST00000225752 379 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup54Q8BTS4 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms