Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm23465-201ENSMUST00000157134 262 ntBASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm4557-201ENSMUST00000185826 907 ntBASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm4526-201ENSMUST00000186039 920 ntBASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm8708-201ENSMUST00000188500 906 ntBASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm18442-201ENSMUST00000220925 639 ntBASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm6988-201ENSMUST00000222676 375 ntBASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm13195-201ENSMUST00000117229 261 ntBASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm14688-201ENSMUST00000119169 303 ntBASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm38360-201ENSMUST00000195130 454 ntBASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ccdc88aQ5SNZ0 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm42615-201ENSMUST00000197704 1820 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm17152-201ENSMUST00000172430 535 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm18802-201ENSMUST00000186270 888 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm37857-201ENSMUST00000191784 1199 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm38053-201ENSMUST00000193938 160 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm44234-201ENSMUST00000204246 900 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.55□□□□□ -1.52
Ccdc88aQ5SNZ0 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm14706-201ENSMUST00000117744 255 ntBASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm13815-201ENSMUST00000119963 412 ntBASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm22940-201ENSMUST00000158560 155 ntBASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 AC132384.5-201ENSMUST00000218562 226 ntBASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Synpr-207ENSMUST00000223583 3362 ntBASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm25748-201ENSMUST00000175487 70 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms