Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm18128-201ENSMUST00000172625 511 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm4842-201ENSMUST00000183237 835 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Mir6899-201ENSMUST00000184798 64 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm38360-201ENSMUST00000195130 454 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm23193-201ENSMUST00000102427 82 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm13733-201ENSMUST00000117290 535 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm16463-201ENSMUST00000120527 721 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm13932-201ENSMUST00000120873 610 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Zakit-201ENSMUST00000157677 308 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm21850-201ENSMUST00000179792 359 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Mir7074-201ENSMUST00000183884 63 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm27564-201ENSMUST00000185196 96 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm9569-201ENSMUST00000187492 787 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm37836-201ENSMUST00000195875 175 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm44319-201ENSMUST00000196974 93 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm43144-201ENSMUST00000198256 485 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm19104-201ENSMUST00000198392 679 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm45608-201ENSMUST00000210948 389 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Nsa2-203ENSMUST00000225410 974 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3aQ3ULJ3 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Gm24124-201ENSMUST00000104103 132 ntBASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Gm16394-201ENSMUST00000117289 675 ntBASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Gm12131-201ENSMUST00000117479 359 ntBASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Gm14985-201ENSMUST00000118693 786 ntBASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Gm12186-201ENSMUST00000119050 945 ntBASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Gm11484-201ENSMUST00000119808 338 ntBASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Gm13867-201ENSMUST00000120844 395 ntBASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Gm13000-201ENSMUST00000120937 496 ntBASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Gm12752-201ENSMUST00000121657 811 ntBASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.16□□□□□ -1.58
Upf3aQ3ULJ3 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms