Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Mir678-201ENSMUST00000102114 84 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm24886-201ENSMUST00000104384 123 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm13811-201ENSMUST00000117800 256 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm13930-201ENSMUST00000118569 368 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm12358-201ENSMUST00000121842 520 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm24236-201ENSMUST00000157794 134 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm26024-201ENSMUST00000158657 322 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm26381-201ENSMUST00000174895 92 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm23269-201ENSMUST00000178701 107 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm28871-201ENSMUST00000186191 687 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm28061-201ENSMUST00000189085 807 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm28843-201ENSMUST00000189198 678 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm28665-201ENSMUST00000189269 670 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm29546-201ENSMUST00000191171 678 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm37493-201ENSMUST00000193167 433 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm42896-201ENSMUST00000201249 1113 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm44142-201ENSMUST00000203358 311 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm18007-201ENSMUST00000205019 844 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm44604-201ENSMUST00000205475 496 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm45196-201ENSMUST00000206751 825 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm45427-201ENSMUST00000209572 1253 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm36247-201ENSMUST00000211834 285 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm5917-201ENSMUST00000217638 721 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 AC131677.1-201ENSMUST00000218721 535 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 AC101984.1-201ENSMUST00000219639 402 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 AC131720.2-201ENSMUST00000220420 431 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 AC164424.1-201ENSMUST00000221690 170 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm5830-201ENSMUST00000049117 443 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col8a1Q00780 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Col8a1Q00780 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Wnk1-218ENSMUST00000161512 1426 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm6757-201ENSMUST00000189810 1706 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm15901-201ENSMUST00000117663 941 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm15331-201ENSMUST00000120225 385 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm16445-201ENSMUST00000120399 714 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm5646-201ENSMUST00000120568 714 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm12808-201ENSMUST00000120597 404 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm12936-201ENSMUST00000121439 301 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms