Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Gm8774-201ENSMUST00000203621 692 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.19□□□□□ -1.9
PrkdcP97313 AC121947.1-201ENSMUST00000221755 1145 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PrkdcP97313 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PrkdcP97313 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PrkdcP97313 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Gm12335-201ENSMUST00000119738 327 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 Gm5284-201ENSMUST00000199053 903 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PrkdcP97313 Gm43781-201ENSMUST00000197634 2681 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PrkdcP97313 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PrkdcP97313 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
PrkdcP97313 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
PrkdcP97313 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Gm38190-201ENSMUST00000192350 4755 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PrkdcP97313 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
PrkdcP97313 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC3.18□□□□□ -1.9
PrkdcP97313 Naip3-201ENSMUST00000118082 4208 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.18□□□□□ -1.9
PrkdcP97313 AC110816.1-201ENSMUST00000218559 980 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Gm18120-201ENSMUST00000220079 511 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Gm22154-201ENSMUST00000083844 131 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PrkdcP97313 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
PrkdcP97313 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC3.18□□□□□ -1.9
PrkdcP97313 Gm15624-203ENSMUST00000204811 3402 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Gm38307-201ENSMUST00000195630 1840 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
PrkdcP97313 Gm11781-201ENSMUST00000118328 472 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Gm26490-201ENSMUST00000157879 140 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Gm6223-201ENSMUST00000178436 871 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Gm27308-201ENSMUST00000184807 233 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Gm9569-201ENSMUST00000187492 787 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Gm38270-201ENSMUST00000192721 407 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Gm43084-201ENSMUST00000200696 947 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Gm44820-201ENSMUST00000207420 396 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Gm45727-201ENSMUST00000212886 572 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Gm37558-201ENSMUST00000193684 2983 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PrkdcP97313 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
PrkdcP97313 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
PrkdcP97313 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PrkdcP97313 Gm36964-201ENSMUST00000191876 198 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Gm8069-201ENSMUST00000197887 154 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
PrkdcP97313 Gm3338-201ENSMUST00000220982 269 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC3.18□□□□□ -1.9
PrkdcP97313 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PrkdcP97313 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PrkdcP97313 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PrkdcP97313 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PrkdcP97313 AC154257.1-201ENSMUST00000224811 1525 ntBASIC3.18□□□□□ -1.9
PrkdcP97313 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PrkdcP97313 Gm42860-201ENSMUST00000196492 3991 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
PrkdcP97313 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Amd-ps1-201ENSMUST00000120127 994 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm14240-201ENSMUST00000120353 546 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm25843-201ENSMUST00000122582 314 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm22940-201ENSMUST00000158560 155 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PrkdcP97313 AC125095.1-201ENSMUST00000228387 2020 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PrkdcP97313 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms