Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CiitaP79621 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CiitaP79621 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 Gm12423-201ENSMUST00000118334 135 ntBASIC5.52□□□□□ -1.53
CiitaP79621 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 Gm25179-201ENSMUST00000122632 128 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 Mir3090-201ENSMUST00000175597 87 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Gm5777-201ENSMUST00000177265 448 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Gm9457-201ENSMUST00000180176 372 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Gm5842-201ENSMUST00000195073 622 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Gm37908-201ENSMUST00000195828 470 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Trdv3-201ENSMUST00000198551 309 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 Gm43295-201ENSMUST00000201439 412 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CiitaP79621 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC5.52□□□□□ -1.53
CiitaP79621 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CiitaP79621 Supt4b-201ENSMUST00000214434 351 ntBASIC5.52□□□□□ -1.53
CiitaP79621 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Gm7822-201ENSMUST00000222433 581 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Gm5457-201ENSMUST00000022260 333 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CiitaP79621 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.52□□□□□ -1.53
CiitaP79621 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CiitaP79621 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
CiitaP79621 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CiitaP79621 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CiitaP79621 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CiitaP79621 Gm14621-201ENSMUST00000117709 689 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Gm15390-201ENSMUST00000120323 738 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Gm11385-201ENSMUST00000121513 570 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Gm15227-201ENSMUST00000121844 399 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Gm25603-201ENSMUST00000158361 105 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Gm16125-201ENSMUST00000159003 339 ntBASIC5.51□□□□□ -1.53
CiitaP79621 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 Gm10074-201ENSMUST00000174543 249 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.51□□□□□ -1.53
CiitaP79621 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5.51□□□□□ -1.53
CiitaP79621 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 Gm2497-201ENSMUST00000189539 601 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Gm38334-201ENSMUST00000195060 313 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Gm36997-201ENSMUST00000195090 707 ntBASIC5.51□□□□□ -1.53
CiitaP79621 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 Gm44403-201ENSMUST00000198554 129 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.51□□□□□ -1.53
CiitaP79621 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.51□□□□□ -1.53
CiitaP79621 Gm6230-201ENSMUST00000208077 780 ntBASIC5.51□□□□□ -1.53
CiitaP79621 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC5.51□□□□□ -1.53
CiitaP79621 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.51□□□□□ -1.53
CiitaP79621 AC154828.2-201ENSMUST00000220908 1070 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Gm8672-201ENSMUST00000221200 332 ntBASIC5.51□□□□□ -1.53
CiitaP79621 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.51□□□□□ -1.53
CiitaP79621 CT009764.1-201ENSMUST00000222260 483 ntBASIC5.51□□□□□ -1.53
CiitaP79621 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.51□□□□□ -1.53
CiitaP79621 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
CiitaP79621 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.51□□□□□ -1.53
CiitaP79621 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.51□□□□□ -1.53
CiitaP79621 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.51□□□□□ -1.53
CiitaP79621 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CiitaP79621 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.51□□□□□ -1.53
CiitaP79621 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC5.5□□□□□ -1.53
CiitaP79621 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 113.8 ms