Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.8□□□□□ -1.64
Fdft1P53798 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.79□□□□□ -1.64
Fdft1P53798 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Fdft1P53798 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Fdft1P53798 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.79□□□□□ -1.64
Fdft1P53798 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.79□□□□□ -1.64
Fdft1P53798 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Fdft1P53798 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Fdft1P53798 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.79□□□□□ -1.64
Fdft1P53798 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
Fdft1P53798 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Fdft1P53798 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Fdft1P53798 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Fdft1P53798 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Fdft1P53798 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Fdft1P53798 Gm25919-201ENSMUST00000104271 132 ntBASIC4.79□□□□□ -1.64
Fdft1P53798 n-R5s16-201ENSMUST00000104555 119 ntBASIC4.79□□□□□ -1.64
Fdft1P53798 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Fdft1P53798 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Fdft1P53798 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.79□□□□□ -1.64
Fdft1P53798 Gm13132-201ENSMUST00000121194 472 ntBASIC4.79□□□□□ -1.64
Fdft1P53798 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Fdft1P53798 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Fdft1P53798 Gm16259-201ENSMUST00000145241 553 ntBASIC4.79□□□□□ -1.64
Fdft1P53798 Gm25048-201ENSMUST00000158598 91 ntBASIC4.79□□□□□ -1.64
Fdft1P53798 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Fdft1P53798 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.79□□□□□ -1.64
Fdft1P53798 Gm28389-201ENSMUST00000190090 697 ntBASIC4.79□□□□□ -1.64
Fdft1P53798 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC4.79□□□□□ -1.64
Fdft1P53798 Gm38150-201ENSMUST00000192996 452 ntBASIC4.79□□□□□ -1.64
Fdft1P53798 Gm20056-201ENSMUST00000194813 519 ntBASIC4.79□□□□□ -1.64
Fdft1P53798 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.79□□□□□ -1.64
Fdft1P53798 Gm43015-201ENSMUST00000199087 565 ntBASIC4.79□□□□□ -1.64
Fdft1P53798 Gm43418-201ENSMUST00000201334 428 ntBASIC4.79□□□□□ -1.64
Fdft1P53798 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Fdft1P53798 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Fdft1P53798 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
Fdft1P53798 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Fdft1P53798 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Fdft1P53798 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Fdft1P53798 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.79□□□□□ -1.64
Fdft1P53798 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Fdft1P53798 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Fdft1P53798 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Fdft1P53798 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Fdft1P53798 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Fdft1P53798 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Fdft1P53798 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Fdft1P53798 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC4.78□□□□□ -1.64
Fdft1P53798 Gm12760-201ENSMUST00000117861 482 ntBASIC4.78□□□□□ -1.64
Fdft1P53798 Gm13489-201ENSMUST00000121234 971 ntBASIC4.78□□□□□ -1.64
Fdft1P53798 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.78□□□□□ -1.64
Fdft1P53798 Gm23700-201ENSMUST00000158842 102 ntBASIC4.78□□□□□ -1.64
Fdft1P53798 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Fdft1P53798 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Fdft1P53798 Gm26318-201ENSMUST00000176507 96 ntBASIC4.78□□□□□ -1.64
Fdft1P53798 Gm27849-201ENSMUST00000183673 125 ntBASIC4.78□□□□□ -1.64
Fdft1P53798 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC4.78□□□□□ -1.64
Fdft1P53798 Gm37070-201ENSMUST00000193272 460 ntBASIC4.78□□□□□ -1.64
Fdft1P53798 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.78□□□□□ -1.64
Fdft1P53798 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.78□□□□□ -1.64
Fdft1P53798 AC123534.1-201ENSMUST00000224060 656 ntBASIC4.78□□□□□ -1.64
Fdft1P53798 Gm16415-201ENSMUST00000080097 489 ntBASIC4.78□□□□□ -1.64
Fdft1P53798 Gm10916-201ENSMUST00000080330 483 ntBASIC4.78□□□□□ -1.64
Fdft1P53798 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Fdft1P53798 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Fdft1P53798 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Fdft1P53798 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Fdft1P53798 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Fdft1P53798 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.77□□□□□ -1.65
Fdft1P53798 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Fdft1P53798 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm23193-201ENSMUST00000102427 82 ntBASIC4.77□□□□□ -1.65
Fdft1P53798 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Fdft1P53798 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm13491-201ENSMUST00000118267 235 ntBASIC4.77□□□□□ -1.65
Fdft1P53798 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.77□□□□□ -1.65
Fdft1P53798 Gm14369-201ENSMUST00000121355 285 ntBASIC4.77□□□□□ -1.65
Fdft1P53798 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm23534-201ENSMUST00000157539 97 ntBASIC4.77□□□□□ -1.65
Fdft1P53798 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm27036-201ENSMUST00000182465 980 ntBASIC4.77□□□□□ -1.65
Fdft1P53798 Gm27543-201ENSMUST00000183562 177 ntBASIC4.77□□□□□ -1.65
Fdft1P53798 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Fdft1P53798 Gm28769-201ENSMUST00000190176 615 ntBASIC4.77□□□□□ -1.65
Fdft1P53798 Gm29454-201ENSMUST00000190805 393 ntBASIC4.77□□□□□ -1.65
Fdft1P53798 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.77□□□□□ -1.65
Fdft1P53798 Gm37243-201ENSMUST00000193407 595 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms