Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
Cux1P53564 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Cux1P53564 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Cux1P53564 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Cux1P53564 Gm43025-201ENSMUST00000201764 1886 ntBASIC7.27□□□□□ -1.25
Cux1P53564 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Cux1P53564 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC7.27□□□□□ -1.25
Cux1P53564 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.27□□□□□ -1.25
Cux1P53564 Gm42876-201ENSMUST00000196989 3215 ntBASIC7.27□□□□□ -1.25
Cux1P53564 Gm6645-201ENSMUST00000118505 2726 ntBASIC7.27□□□□□ -1.25
Cux1P53564 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC7.27□□□□□ -1.25
Cux1P53564 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Cux1P53564 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC7.27□□□□□ -1.25
Cux1P53564 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Cux1P53564 Gm14067-201ENSMUST00000119340 314 ntBASIC7.27□□□□□ -1.25
Cux1P53564 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC7.27□□□□□ -1.25
Cux1P53564 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC7.27□□□□□ -1.25
Cux1P53564 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Cux1P53564 Mir6907-201ENSMUST00000183764 71 ntBASIC7.27□□□□□ -1.25
Cux1P53564 Gm5284-201ENSMUST00000199053 903 ntBASIC7.27□□□□□ -1.25
Cux1P53564 Gm43093-201ENSMUST00000202439 1213 ntBASIC7.27□□□□□ -1.25
Cux1P53564 Gm44650-201ENSMUST00000206929 194 ntBASIC7.27□□□□□ -1.25
Cux1P53564 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC7.27□□□□□ -1.25
Cux1P53564 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC7.27□□□□□ -1.25
Cux1P53564 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Cux1P53564 Gm23464-201ENSMUST00000083145 147 ntBASIC7.27□□□□□ -1.25
Cux1P53564 Mir338-201ENSMUST00000083666 98 ntBASIC7.27□□□□□ -1.25
Cux1P53564 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Cux1P53564 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Cux1P53564 Gm44567-201ENSMUST00000205645 2631 ntBASIC7.26□□□□□ -1.25
Cux1P53564 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Cux1P53564 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Cux1P53564 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Cux1P53564 Gm43870-201ENSMUST00000205102 4369 ntBASIC7.26□□□□□ -1.25
Cux1P53564 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Cux1P53564 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Cux1P53564 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Cux1P53564 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Cux1P53564 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Cux1P53564 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC7.26□□□□□ -1.25
Cux1P53564 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC7.26□□□□□ -1.25
Cux1P53564 Gm19807-201ENSMUST00000173971 667 ntBASIC7.26□□□□□ -1.25
Cux1P53564 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Cux1P53564 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Cux1P53564 Gm27414-201ENSMUST00000185033 381 ntBASIC7.26□□□□□ -1.25
Cux1P53564 Gm28304-201ENSMUST00000185977 312 ntBASIC7.26□□□□□ -1.25
Cux1P53564 Gm29256-201ENSMUST00000189094 312 ntBASIC7.26□□□□□ -1.25
Cux1P53564 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Cux1P53564 Gm28484-201ENSMUST00000190606 312 ntBASIC7.26□□□□□ -1.25
Cux1P53564 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC7.26□□□□□ -1.25
Cux1P53564 Gm44234-201ENSMUST00000204246 900 ntBASIC7.26□□□□□ -1.25
Cux1P53564 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Cux1P53564 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Cux1P53564 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Cux1P53564 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Cux1P53564 AC102847.2-201ENSMUST00000227799 2906 ntBASIC7.26□□□□□ -1.25
Cux1P53564 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
Cux1P53564 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Cux1P53564 Synpr-207ENSMUST00000223583 3362 ntBASIC7.25□□□□□ -1.25
Cux1P53564 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Cux1P53564 Gm14656-201ENSMUST00000120342 502 ntBASIC7.25□□□□□ -1.25
Cux1P53564 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC7.25□□□□□ -1.25
Cux1P53564 Gm22536-201ENSMUST00000158171 134 ntBASIC7.25□□□□□ -1.25
Cux1P53564 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC7.25□□□□□ -1.25
Cux1P53564 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC7.25□□□□□ -1.25
Cux1P53564 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC7.25□□□□□ -1.25
Cux1P53564 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC7.25□□□□□ -1.25
Cux1P53564 Gm44852-201ENSMUST00000207950 369 ntBASIC7.25□□□□□ -1.25
Cux1P53564 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Cux1P53564 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Cux1P53564 Gm6065-201ENSMUST00000081336 492 ntBASIC7.25□□□□□ -1.25
Cux1P53564 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Cux1P53564 Gm6043-201ENSMUST00000099961 492 ntBASIC7.25□□□□□ -1.25
Cux1P53564 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Cux1P53564 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC7.25□□□□□ -1.25
Cux1P53564 Gm42955-201ENSMUST00000197355 3393 ntBASIC7.25□□□□□ -1.25
Cux1P53564 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Cux1P53564 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cux1P53564 Gm3675-201ENSMUST00000175904 1653 ntBASIC7.24□□□□□ -1.25
Cux1P53564 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Cux1P53564 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cux1P53564 Gm23481-201ENSMUST00000104173 131 ntBASIC7.24□□□□□ -1.25
Cux1P53564 Gm12041-201ENSMUST00000121606 602 ntBASIC7.24□□□□□ -1.25
Cux1P53564 Gm12893-201ENSMUST00000121732 275 ntBASIC7.24□□□□□ -1.25
Cux1P53564 Gm11506-201ENSMUST00000122414 470 ntBASIC7.24□□□□□ -1.25
Cux1P53564 Gm20657-201ENSMUST00000177079 515 ntBASIC7.24□□□□□ -1.25
Cux1P53564 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Cux1P53564 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC7.24□□□□□ -1.25
Cux1P53564 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC7.24□□□□□ -1.25
Cux1P53564 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC7.24□□□□□ -1.25
Cux1P53564 Gm31931-201ENSMUST00000219666 222 ntBASIC7.24□□□□□ -1.25
Cux1P53564 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC7.24□□□□□ -1.25
Cux1P53564 AC114573.1-201ENSMUST00000224120 1210 ntBASIC7.24□□□□□ -1.25
Cux1P53564 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Cux1P53564 Gm10540-201ENSMUST00000097581 276 ntBASIC7.24□□□□□ -1.25
Cux1P53564 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cux1P53564 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cux1P53564 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC7.24□□□□□ -1.25
Cux1P53564 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cux1P53564 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms