Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm13679-201ENSMUST00000118678 484 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 H3f3c-201ENSMUST00000119459 411 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 Gm15786-201ENSMUST00000121079 450 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 Gm14383-201ENSMUST00000121637 386 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.82□□□□□ -1.48
Shmt1P50431 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 Gm26194-201ENSMUST00000175036 71 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Shmt1P50431 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Shmt1P50431 Gm5473-201ENSMUST00000179326 642 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Mir7687-201ENSMUST00000184722 59 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Gm43367-201ENSMUST00000199986 625 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC5.82□□□□□ -1.48
Shmt1P50431 Gm35648-201ENSMUST00000202304 475 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Shmt1P50431 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Shmt1P50431 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC5.82□□□□□ -1.48
Shmt1P50431 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Shmt1P50431 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Gm24150-201ENSMUST00000082759 104 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Shmt1P50431 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Shmt1P50431 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Shmt1P50431 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Shmt1P50431 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC5.82□□□□□ -1.48
Shmt1P50431 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC5.82□□□□□ -1.48
Shmt1P50431 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.82□□□□□ -1.48
Shmt1P50431 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.82□□□□□ -1.48
Shmt1P50431 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Shmt1P50431 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Shmt1P50431 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Shmt1P50431 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Shmt1P50431 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Shmt1P50431 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Shmt1P50431 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Shmt1P50431 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Shmt1P50431 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Shmt1P50431 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Shmt1P50431 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Shmt1P50431 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Shmt1P50431 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Shmt1P50431 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Shmt1P50431 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Shmt1P50431 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.81□□□□□ -1.48
Shmt1P50431 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Gm15176-201ENSMUST00000117734 135 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Gm13579-201ENSMUST00000118519 517 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Gm12074-201ENSMUST00000120189 219 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Gm13720-201ENSMUST00000120741 196 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Mir1903-201ENSMUST00000122574 80 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Shmt1P50431 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.81□□□□□ -1.48
Shmt1P50431 Gm11197-201ENSMUST00000145158 839 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Gm23034-201ENSMUST00000158001 147 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Gm24295-201ENSMUST00000158298 131 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC5.81□□□□□ -1.48
Shmt1P50431 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC5.81□□□□□ -1.48
Shmt1P50431 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Shmt1P50431 Gm7335-201ENSMUST00000172475 373 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Shmt1P50431 Gm23806-201ENSMUST00000175157 109 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Gm8669-201ENSMUST00000183839 945 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Shmt1P50431 Gm37098-201ENSMUST00000192290 244 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.81□□□□□ -1.48
Shmt1P50431 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC5.81□□□□□ -1.48
Shmt1P50431 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Shmt1P50431 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Shmt1P50431 Mir449a-201ENSMUST00000083641 91 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Shmt1P50431 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Shmt1P50431 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.81□□□□□ -1.48
Shmt1P50431 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.81□□□□□ -1.48
Shmt1P50431 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms