Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 AC123533.2-201ENSMUST00000228176 375 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Rfx1P48377 Gm8412-201ENSMUST00000077493 440 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Rfx1P48377 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Rfx1P48377 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 Gm38307-201ENSMUST00000195630 1840 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Rfx1P48377 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Rfx1P48377 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Rfx1P48377 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Rfx1P48377 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Rfx1P48377 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Rfx1P48377 Gm25785-201ENSMUST00000104129 125 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Rfx1P48377 Gm14901-201ENSMUST00000119001 283 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 Gm7746-201ENSMUST00000120966 503 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 Gm13162-201ENSMUST00000121481 454 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 Gm7846-201ENSMUST00000145844 274 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC7.09□□□□□ -1.27
Rfx1P48377 Gm21754-201ENSMUST00000177550 479 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Rfx1P48377 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Rfx1P48377 Gm29592-201ENSMUST00000189434 370 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 Gm42522-201ENSMUST00000196071 255 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 Gm42539-201ENSMUST00000197009 308 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC7.09□□□□□ -1.27
Rfx1P48377 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC7.09□□□□□ -1.27
Rfx1P48377 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC7.09□□□□□ -1.27
Rfx1P48377 AC131033.1-201ENSMUST00000228223 279 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Rfx1P48377 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 Gm23686-201ENSMUST00000083241 164 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Rfx1P48377 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 AC132852.2-201ENSMUST00000216052 2794 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Rfx1P48377 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Rfx1P48377 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Rfx1P48377 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC7.09□□□□□ -1.27
Rfx1P48377 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Rfx1P48377 Gm13100-201ENSMUST00000117157 1439 ntBASIC7.09□□□□□ -1.28
Rfx1P48377 Gm12057-201ENSMUST00000117244 1427 ntBASIC7.09□□□□□ -1.28
Rfx1P48377 Gm42531-201ENSMUST00000201648 4048 ntBASIC7.09□□□□□ -1.28
Rfx1P48377 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Rfx1P48377 Dnm3os-201ENSMUST00000139662 7928 ntBASIC7.09□□□□□ -1.28
Rfx1P48377 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Rfx1P48377 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rfx1P48377 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Rfx1P48377 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Rfx1P48377 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rfx1P48377 AC127371.2-201ENSMUST00000228108 1933 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Rfx1P48377 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Rfx1P48377 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
Rfx1P48377 Gm7974-201ENSMUST00000117154 408 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rfx1P48377 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm14331-201ENSMUST00000120396 409 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm22199-201ENSMUST00000122660 126 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC7.08□□□□□ -1.28
Rfx1P48377 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC7.08□□□□□ -1.28
Rfx1P48377 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rfx1P48377 Snora47-201ENSMUST00000157483 138 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm22841-201ENSMUST00000158443 62 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm17142-201ENSMUST00000164933 645 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Mir5101-201ENSMUST00000175181 83 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm9285-201ENSMUST00000177691 697 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC7.08□□□□□ -1.28
Rfx1P48377 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC7.08□□□□□ -1.28
Rfx1P48377 Gm29489-201ENSMUST00000188934 324 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC7.08□□□□□ -1.28
Rfx1P48377 Gm20832-201ENSMUST00000189076 665 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC7.08□□□□□ -1.28
Rfx1P48377 Gm29524-201ENSMUST00000190819 699 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm38109-201ENSMUST00000195386 181 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm37358-201ENSMUST00000195492 479 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm30638-201ENSMUST00000195570 656 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm36728-201ENSMUST00000195782 665 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm43467-201ENSMUST00000197441 437 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm29736-201ENSMUST00000198189 385 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm43142-201ENSMUST00000198670 361 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC7.08□□□□□ -1.28
Rfx1P48377 Gm34783-201ENSMUST00000209159 303 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Gm18891-201ENSMUST00000216734 1087 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rfx1P48377 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rfx1P48377 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC7.08□□□□□ -1.28
Rfx1P48377 AC134468.2-201ENSMUST00000222549 672 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 AC158511.1-201ENSMUST00000223622 764 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 AC133598.3-204ENSMUST00000224260 767 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms