Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC4.38□□□□□ -1.71
P20040 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
P20040 Gm26993-201ENSMUST00000182766 789 ntBASIC4.38□□□□□ -1.71
P20040 Mir7222-201ENSMUST00000183740 75 ntBASIC4.38□□□□□ -1.71
P20040 Mir7012-201ENSMUST00000183900 64 ntBASIC4.38□□□□□ -1.71
P20040 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.38□□□□□ -1.71
P20040 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
P20040 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC4.38□□□□□ -1.71
P20040 Gm28061-201ENSMUST00000189085 807 ntBASIC4.38□□□□□ -1.71
P20040 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.38□□□□□ -1.71
P20040 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC4.38□□□□□ -1.71
P20040 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC4.38□□□□□ -1.71
P20040 Gm4321-201ENSMUST00000200520 442 ntBASIC4.38□□□□□ -1.71
P20040 Gm4574-201ENSMUST00000207804 542 ntBASIC4.38□□□□□ -1.71
P20040 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.38□□□□□ -1.71
P20040 Gm7588-201ENSMUST00000216866 571 ntBASIC4.38□□□□□ -1.71
P20040 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.38□□□□□ -1.71
P20040 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.38□□□□□ -1.71
P20040 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
P20040 Gm20368-201ENSMUST00000220716 301 ntBASIC4.38□□□□□ -1.71
P20040 Gm22741-201ENSMUST00000083438 165 ntBASIC4.38□□□□□ -1.71
P20040 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
P20040 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
P20040 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
P20040 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
P20040 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
P20040 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
P20040 Gm18719-201ENSMUST00000196696 1413 ntBASIC4.38□□□□□ -1.71
P20040 Gm43921-201ENSMUST00000204296 1792 ntBASIC4.37□□□□□ -1.71
P20040 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
P20040 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
P20040 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
P20040 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
P20040 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.37□□□□□ -1.71
P20040 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
P20040 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
P20040 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
P20040 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
P20040 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
P20040 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.37□□□□□ -1.71
P20040 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
P20040 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.37□□□□□ -1.71
P20040 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.37□□□□□ -1.71
P20040 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
P20040 Gm14512-201ENSMUST00000117924 230 ntBASIC4.37□□□□□ -1.71
P20040 Gm14082-201ENSMUST00000118582 801 ntBASIC4.37□□□□□ -1.71
P20040 Gm13367-201ENSMUST00000119955 796 ntBASIC4.37□□□□□ -1.71
P20040 Gm24371-201ENSMUST00000122662 267 ntBASIC4.37□□□□□ -1.71
P20040 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.37□□□□□ -1.71
P20040 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.37□□□□□ -1.71
P20040 Gm17044-201ENSMUST00000168549 828 ntBASIC4.37□□□□□ -1.71
P20040 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC4.37□□□□□ -1.71
P20040 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
P20040 Gm28094-201ENSMUST00000185262 390 ntBASIC4.37□□□□□ -1.71
P20040 Gm28353-201ENSMUST00000186482 570 ntBASIC4.37□□□□□ -1.71
P20040 Gm28533-201ENSMUST00000186741 570 ntBASIC4.37□□□□□ -1.71
P20040 Gm5058-201ENSMUST00000187331 463 ntBASIC4.37□□□□□ -1.71
P20040 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
P20040 Gm9134-201ENSMUST00000193186 551 ntBASIC4.37□□□□□ -1.71
P20040 Gm18445-201ENSMUST00000195502 774 ntBASIC4.37□□□□□ -1.71
P20040 Gm44485-201ENSMUST00000199569 137 ntBASIC4.37□□□□□ -1.71
P20040 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
P20040 AC155266.1-201ENSMUST00000220762 904 ntBASIC4.37□□□□□ -1.71
P20040 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.37□□□□□ -1.71
P20040 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.37□□□□□ -1.71
P20040 CT025552.1-201ENSMUST00000224561 521 ntBASIC4.37□□□□□ -1.71
P20040 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.37□□□□□ -1.71
P20040 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.37□□□□□ -1.71
P20040 AC163646.1-201ENSMUST00000227704 397 ntBASIC4.37□□□□□ -1.71
P20040 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
P20040 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
P20040 Mir338-201ENSMUST00000083666 98 ntBASIC4.37□□□□□ -1.71
P20040 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.37□□□□□ -1.71
P20040 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
P20040 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.37□□□□□ -1.71
P20040 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
P20040 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
P20040 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.37□□□□□ -1.71
P20040 Gm18422-202ENSMUST00000203798 2214 ntBASIC4.37□□□□□ -1.71
P20040 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
P20040 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.37□□□□□ -1.71
P20040 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
P20040 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
P20040 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
P20040 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.36□□□□□ -1.71
P20040 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
P20040 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.36□□□□□ -1.71
P20040 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
P20040 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
P20040 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
P20040 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
P20040 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
P20040 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
P20040 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
P20040 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
P20040 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
P20040 Gm25418-201ENSMUST00000104214 129 ntBASIC4.36□□□□□ -1.71
P20040 Gm11196-201ENSMUST00000119052 395 ntBASIC4.36□□□□□ -1.71
P20040 Gm14175-201ENSMUST00000119835 241 ntBASIC4.36□□□□□ -1.71
P20040 Gm14516-201ENSMUST00000120012 252 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms