Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TnfP06804 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TnfP06804 Gm24031-201ENSMUST00000083930 131 ntBASIC5.1□□□□□ -1.59
TnfP06804 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TnfP06804 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TnfP06804 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TnfP06804 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TnfP06804 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.1□□□□□ -1.59
TnfP06804 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
TnfP06804 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TnfP06804 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.09□□□□□ -1.59
TnfP06804 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TnfP06804 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TnfP06804 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.09□□□□□ -1.59
TnfP06804 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TnfP06804 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.09□□□□□ -1.59
TnfP06804 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.09□□□□□ -1.59
TnfP06804 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TnfP06804 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TnfP06804 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TnfP06804 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TnfP06804 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TnfP06804 Gm23948-201ENSMUST00000104030 132 ntBASIC5.09□□□□□ -1.59
TnfP06804 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.09□□□□□ -1.59
TnfP06804 Gm12112-201ENSMUST00000117772 231 ntBASIC5.09□□□□□ -1.59
TnfP06804 Gm12988-201ENSMUST00000119054 478 ntBASIC5.09□□□□□ -1.59
TnfP06804 Gm11584-201ENSMUST00000120636 325 ntBASIC5.09□□□□□ -1.59
TnfP06804 Gm13745-201ENSMUST00000121994 527 ntBASIC5.09□□□□□ -1.59
TnfP06804 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TnfP06804 Gm23318-201ENSMUST00000158000 108 ntBASIC5.09□□□□□ -1.59
TnfP06804 Gm23115-201ENSMUST00000158480 108 ntBASIC5.09□□□□□ -1.59
TnfP06804 Gm22177-201ENSMUST00000175002 158 ntBASIC5.09□□□□□ -1.59
TnfP06804 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TnfP06804 Gm6051-201ENSMUST00000201529 352 ntBASIC5.09□□□□□ -1.59
TnfP06804 Gm44623-201ENSMUST00000207934 434 ntBASIC5.09□□□□□ -1.59
TnfP06804 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.09□□□□□ -1.59
TnfP06804 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TnfP06804 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.09□□□□□ -1.59
TnfP06804 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.09□□□□□ -1.59
TnfP06804 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TnfP06804 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TnfP06804 Gm25140-201ENSMUST00000083254 140 ntBASIC5.09□□□□□ -1.59
TnfP06804 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.09□□□□□ -1.59
TnfP06804 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.09□□□□□ -1.59
TnfP06804 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.09□□□□□ -1.59
TnfP06804 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TnfP06804 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TnfP06804 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.09□□□□□ -1.6
TnfP06804 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
TnfP06804 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.09□□□□□ -1.6
TnfP06804 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TnfP06804 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.09□□□□□ -1.6
TnfP06804 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
TnfP06804 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.09□□□□□ -1.6
TnfP06804 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TnfP06804 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TnfP06804 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.08□□□□□ -1.6
TnfP06804 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TnfP06804 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TnfP06804 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TnfP06804 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TnfP06804 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TnfP06804 Gm23014-201ENSMUST00000104144 130 ntBASIC5.08□□□□□ -1.6
TnfP06804 Gm24469-201ENSMUST00000104487 131 ntBASIC5.08□□□□□ -1.6
TnfP06804 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Gm14909-201ENSMUST00000117853 351 ntBASIC5.08□□□□□ -1.6
TnfP06804 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.08□□□□□ -1.6
TnfP06804 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TnfP06804 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Gm26085-201ENSMUST00000157900 116 ntBASIC5.08□□□□□ -1.6
TnfP06804 Gm20428-201ENSMUST00000174365 283 ntBASIC5.08□□□□□ -1.6
TnfP06804 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Mir6963-201ENSMUST00000183535 71 ntBASIC5.08□□□□□ -1.6
TnfP06804 Gm27468-201ENSMUST00000183577 106 ntBASIC5.08□□□□□ -1.6
TnfP06804 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TnfP06804 Gm21856-201ENSMUST00000187547 696 ntBASIC5.08□□□□□ -1.6
TnfP06804 Gm21735-201ENSMUST00000190360 696 ntBASIC5.08□□□□□ -1.6
TnfP06804 Gm29781-201ENSMUST00000203862 478 ntBASIC5.08□□□□□ -1.6
TnfP06804 Gm44757-201ENSMUST00000206373 157 ntBASIC5.08□□□□□ -1.6
TnfP06804 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.08□□□□□ -1.6
TnfP06804 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TnfP06804 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TnfP06804 Gm23300-201ENSMUST00000082712 125 ntBASIC5.08□□□□□ -1.6
TnfP06804 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TnfP06804 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TnfP06804 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.08□□□□□ -1.6
TnfP06804 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TnfP06804 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms