Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC3.86□□□□□ -1.79
Hmgb3O54879 AC154305.3-201ENSMUST00000224661 552 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Hmgb3O54879 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Hmgb3O54879 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hmgb3O54879 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Hmgb3O54879 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Hmgb3O54879 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hmgb3O54879 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hmgb3O54879 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm12731-201ENSMUST00000120932 268 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm12041-201ENSMUST00000121606 602 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm12893-201ENSMUST00000121732 275 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm25806-201ENSMUST00000122782 122 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Hmgb3O54879 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm15795-201ENSMUST00000160969 553 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC3.85□□□□□ -1.79
Hmgb3O54879 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm16114-201ENSMUST00000161930 300 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC3.85□□□□□ -1.79
Hmgb3O54879 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm5842-201ENSMUST00000195073 622 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm43304-201ENSMUST00000196803 326 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC3.85□□□□□ -1.79
Hmgb3O54879 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC3.85□□□□□ -1.79
Hmgb3O54879 Olfr151-202ENSMUST00000221099 929 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC3.85□□□□□ -1.79
Hmgb3O54879 AC154576.2-203ENSMUST00000224736 253 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 AC122858.1-201ENSMUST00000226212 433 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 AC122858.3-201ENSMUST00000226341 740 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 AC122858.1-202ENSMUST00000228290 986 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hmgb3O54879 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Hmgb3O54879 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hmgb3O54879 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm37099-201ENSMUST00000191902 3451 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC3.85□□□□□ -1.79
Hmgb3O54879 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Hmgb3O54879 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Hmgb3O54879 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Hmgb3O54879 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC3.85□□□□□ -1.79
Hmgb3O54879 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC3.85□□□□□ -1.79
Hmgb3O54879 Gm33378-201ENSMUST00000219831 2758 ntBASIC3.85□□□□□ -1.79
Hmgb3O54879 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hmgb3O54879 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hmgb3O54879 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Hmgb3O54879 AC160130.1-201ENSMUST00000220734 2735 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm8202-201ENSMUST00000117682 310 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm14784-201ENSMUST00000121604 663 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm22343-201ENSMUST00000122648 286 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm24295-201ENSMUST00000158298 131 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm10177-201ENSMUST00000160052 444 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm7609-204ENSMUST00000161424 461 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm16378-201ENSMUST00000179168 342 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm28116-201ENSMUST00000189064 387 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm28957-201ENSMUST00000190174 373 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Igkv15-101-201ENSMUST00000195917 299 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm18867-201ENSMUST00000198022 1179 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm38670-201ENSMUST00000199248 77 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 AC112956.1-201ENSMUST00000213563 492 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm18705-201ENSMUST00000215985 913 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC3.84□□□□□ -1.79
Hmgb3O54879 AC158807.1-201ENSMUST00000217959 187 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 AC117202.1-201ENSMUST00000227007 445 ntBASIC3.84□□□□□ -1.79
Hmgb3O54879 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Hmgb3O54879 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms