Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Mir17-201ENSMUST00000083574 84 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm12245-201ENSMUST00000117266 357 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm12285-201ENSMUST00000117347 233 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm15185-201ENSMUST00000117397 746 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm11971-201ENSMUST00000117715 288 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm26490-201ENSMUST00000157879 140 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm22355-201ENSMUST00000175531 96 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm18828-202ENSMUST00000181035 310 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm5284-201ENSMUST00000199053 903 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm44559-201ENSMUST00000207177 1012 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm19189-201ENSMUST00000221689 754 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm5045-201ENSMUST00000027054 810 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm6776-201ENSMUST00000057752 900 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Chmp2aQ9DB34 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm14575-201ENSMUST00000117210 560 ntBASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm11346-201ENSMUST00000118346 704 ntBASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm11313-201ENSMUST00000118779 432 ntBASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm23964-201ENSMUST00000157966 107 ntBASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm3531-201ENSMUST00000162698 489 ntBASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm18482-201ENSMUST00000202405 760 ntBASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm3816-201ENSMUST00000209803 433 ntBASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm45789-201ENSMUST00000213038 364 ntBASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.02□□□□□ -1.61
Chmp2aQ9DB34 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Chmp2aQ9DB34 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 119.7 ms