Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm18791-201ENSMUST00000204611 726 ntBASIC5.64□□□□□ -1.51
Smc1aQ9CU62 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Gm23302-201ENSMUST00000082710 100 ntBASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Mir129-2-201ENSMUST00000083577 90 ntBASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Smc5-206ENSMUST00000226111 3265 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Gm24350-201ENSMUST00000104163 133 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Gm11912-201ENSMUST00000117235 264 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Gm11742-201ENSMUST00000119903 233 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Gm7973-201ENSMUST00000122107 488 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Gm16566-201ENSMUST00000160387 910 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Mir6963-201ENSMUST00000183535 71 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Mir7031-201ENSMUST00000183860 65 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Gm27551-201ENSMUST00000184258 77 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Gm43315-201ENSMUST00000198120 313 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Smc1aQ9CU62 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.63□□□□□ -1.51
Smc1aQ9CU62 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm23692-201ENSMUST00000101881 160 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm23879-201ENSMUST00000116874 126 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm24402-201ENSMUST00000157873 91 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm7316-201ENSMUST00000165395 445 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Mir7222-201ENSMUST00000183740 75 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm37241-201ENSMUST00000191736 523 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm44412-201ENSMUST00000203018 294 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm44074-201ENSMUST00000204562 337 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.62□□□□□ -1.51
Smc1aQ9CU62 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Gm23508-201ENSMUST00000083079 72 ntBASIC5.62□□□□□ -1.51
Smc1aQ9CU62 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms