Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm13738-201ENSMUST00000122437 469 ntBASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm16557-201ENSMUST00000159182 191 ntBASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm16566-201ENSMUST00000160387 910 ntBASIC4.64□□□□□ -1.67
Use1Q9CQ56 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm7316-201ENSMUST00000165395 445 ntBASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm28429-201ENSMUST00000188521 363 ntBASIC4.64□□□□□ -1.67
Use1Q9CQ56 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm37241-201ENSMUST00000191736 523 ntBASIC4.64□□□□□ -1.67
Use1Q9CQ56 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm46192-201ENSMUST00000217894 326 ntBASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.64□□□□□ -1.67
Use1Q9CQ56 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.64□□□□□ -1.67
Use1Q9CQ56 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Use1Q9CQ56 AC159308.1-201ENSMUST00000216615 1351 ntBASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.64□□□□□ -1.67
Use1Q9CQ56 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Gm11912-201ENSMUST00000117235 264 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Gm22725-201ENSMUST00000158092 110 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Gm24664-201ENSMUST00000158939 100 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Gm18183-201ENSMUST00000191024 615 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Gm34176-201ENSMUST00000192621 474 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Gm4410-201ENSMUST00000199349 686 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Gm43554-201ENSMUST00000199987 186 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Gm43794-201ENSMUST00000200971 692 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.63□□□□□ -1.67
Use1Q9CQ56 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Gm45874-201ENSMUST00000212423 346 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC4.63□□□□□ -1.67
Use1Q9CQ56 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.63□□□□□ -1.67
Use1Q9CQ56 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
Use1Q9CQ56 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.62□□□□□ -1.67
Use1Q9CQ56 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Use1Q9CQ56 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.62□□□□□ -1.67
Use1Q9CQ56 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Use1Q9CQ56 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.62□□□□□ -1.67
Use1Q9CQ56 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.62□□□□□ -1.67
Use1Q9CQ56 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.62□□□□□ -1.67
Use1Q9CQ56 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Use1Q9CQ56 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Use1Q9CQ56 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Use1Q9CQ56 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Use1Q9CQ56 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Use1Q9CQ56 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Use1Q9CQ56 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Use1Q9CQ56 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
Use1Q9CQ56 Gm14082-201ENSMUST00000118582 801 ntBASIC4.62□□□□□ -1.67
Use1Q9CQ56 Gm3943-201ENSMUST00000118606 718 ntBASIC4.62□□□□□ -1.67
Use1Q9CQ56 Gm11877-201ENSMUST00000118921 852 ntBASIC4.62□□□□□ -1.67
Use1Q9CQ56 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.62□□□□□ -1.67
Use1Q9CQ56 Gm11805-201ENSMUST00000121238 600 ntBASIC4.62□□□□□ -1.67
Use1Q9CQ56 Gm22343-201ENSMUST00000122648 286 ntBASIC4.62□□□□□ -1.67
Use1Q9CQ56 Gm24383-201ENSMUST00000122691 333 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms