Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Gm24636-201ENSMUST00000158673 288 ntBASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Gm22698-201ENSMUST00000175375 108 ntBASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Mir6344-201ENSMUST00000183462 104 ntBASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Gm19206-201ENSMUST00000186401 827 ntBASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Gm43304-201ENSMUST00000196803 326 ntBASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Gm5284-201ENSMUST00000199053 903 ntBASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Gm19195-201ENSMUST00000222018 511 ntBASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 AC160114.2-201ENSMUST00000223021 300 ntBASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ccdc28aQ8CEI3 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm13488-201ENSMUST00000120419 179 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm25389-201ENSMUST00000157340 286 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm22819-201ENSMUST00000157445 303 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm26373-201ENSMUST00000157833 103 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm5258-201ENSMUST00000165437 327 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm3145-201ENSMUST00000188584 220 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm19231-201ENSMUST00000193212 830 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm38217-201ENSMUST00000194358 910 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 AC192333.6-201ENSMUST00000224565 725 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 AC122035.2-201ENSMUST00000228698 462 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Olfr192-201ENSMUST00000080251 925 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm25140-201ENSMUST00000083254 140 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Mir133b-201ENSMUST00000083546 119 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.92□□□□□ -1.62
Ccdc28aQ8CEI3 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Mir290a-201ENSMUST00000104627 83 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm13924-201ENSMUST00000119899 486 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm14784-201ENSMUST00000121604 663 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm26046-201ENSMUST00000157312 166 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm3008-201ENSMUST00000160566 571 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm16114-201ENSMUST00000161930 300 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm6647-201ENSMUST00000170514 641 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Mir3097-201ENSMUST00000175356 67 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm37881-201ENSMUST00000193001 421 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm37095-201ENSMUST00000195421 205 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm19596-201ENSMUST00000203685 739 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm7825-201ENSMUST00000204046 416 ntBASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.91□□□□□ -1.62
Ccdc28aQ8CEI3 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms