Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Gm26376-201ENSMUST00000104784 110 ntBASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Gm15012-201ENSMUST00000119176 106 ntBASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Gm22870-201ENSMUST00000157501 112 ntBASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Gm4134-201ENSMUST00000173244 563 ntBASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Gm18828-202ENSMUST00000181035 310 ntBASIC5.84□□□□□ -1.47
Nup88Q8CEC0 V1rg10-201ENSMUST00000183378 937 ntBASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Gm29588-201ENSMUST00000185738 298 ntBASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Gm20940-201ENSMUST00000197308 360 ntBASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.84□□□□□ -1.47
Nup88Q8CEC0 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nup88Q8CEC0 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.84□□□□□ -1.48
Nup88Q8CEC0 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Nup88Q8CEC0 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.48
Nup88Q8CEC0 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Nup88Q8CEC0 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
Nup88Q8CEC0 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm24142-201ENSMUST00000101960 107 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm11366-201ENSMUST00000119279 429 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm15791-201ENSMUST00000120365 319 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm23534-201ENSMUST00000157539 97 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm26371-201ENSMUST00000157829 104 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Mir6963-201ENSMUST00000183535 71 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Mir7031-201ENSMUST00000183860 65 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm37996-201ENSMUST00000191859 367 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm10048-201ENSMUST00000194196 372 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm37720-201ENSMUST00000195497 1241 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm37614-201ENSMUST00000195645 210 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm32453-201ENSMUST00000204183 456 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 AC158388.1-201ENSMUST00000225441 256 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.83□□□□□ -1.48
Nup88Q8CEC0 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms