Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm29503-201ENSMUST00000191044 930 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm38166-201ENSMUST00000191660 471 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm43724-201ENSMUST00000197516 226 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm6064-201ENSMUST00000203999 454 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm23448-201ENSMUST00000083151 104 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Mir449a-201ENSMUST00000083641 91 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Ubfd1Q78JW9 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Ubfd1Q78JW9 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Ubfd1Q78JW9 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Ubfd1Q78JW9 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Ubfd1Q78JW9 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Ubfd1Q78JW9 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Ubfd1Q78JW9 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm15001-201ENSMUST00000117657 795 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm11975-201ENSMUST00000118772 481 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm11835-201ENSMUST00000120635 663 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm24444-201ENSMUST00000157244 308 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm6872-201ENSMUST00000165001 700 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm17907-201ENSMUST00000173150 710 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm22646-201ENSMUST00000175130 115 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm29489-201ENSMUST00000188934 324 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm37576-201ENSMUST00000194228 372 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm18036-201ENSMUST00000195256 272 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm36985-201ENSMUST00000195595 379 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm42437-201ENSMUST00000197263 923 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm43717-201ENSMUST00000198684 310 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm5284-201ENSMUST00000199053 903 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm7688-201ENSMUST00000212857 337 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm34005-201ENSMUST00000215834 282 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 CT030684.2-201ENSMUST00000228946 826 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Gm6776-201ENSMUST00000057752 900 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Olfr815-201ENSMUST00000071557 951 ntBASIC5.33□□□□□ -1.56
Ubfd1Q78JW9 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms