Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Mir92b-201ENSMUST00000102300 83 ntBASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Gm15206-201ENSMUST00000119143 454 ntBASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Gm14831-201ENSMUST00000120253 409 ntBASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Gm21999-201ENSMUST00000165985 387 ntBASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Mir6344-201ENSMUST00000183462 104 ntBASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Gm6546-201ENSMUST00000192096 766 ntBASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Gm38011-201ENSMUST00000193312 279 ntBASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Gm8891-201ENSMUST00000198546 832 ntBASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Gm17999-201ENSMUST00000211568 542 ntBASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Gm8672-201ENSMUST00000221200 332 ntBASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Snora52-201ENSMUST00000082732 137 ntBASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Gm23594-201ENSMUST00000104307 134 ntBASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Gm14388-201ENSMUST00000118119 477 ntBASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Gm12717-201ENSMUST00000118427 983 ntBASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Gm26828-201ENSMUST00000180640 172 ntBASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Gm37670-201ENSMUST00000193622 229 ntBASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Gm37167-201ENSMUST00000194946 396 ntBASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Gm45733-201ENSMUST00000212988 437 ntBASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 AV026068-224ENSMUST00000224827 928 ntBASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3aQ3ULJ3 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Gm23023-201ENSMUST00000158767 109 ntBASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Gm22177-201ENSMUST00000175002 158 ntBASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Gm27286-201ENSMUST00000184934 179 ntBASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Gm28847-201ENSMUST00000186778 700 ntBASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Gm8599-201ENSMUST00000193033 457 ntBASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Gm44138-201ENSMUST00000204939 271 ntBASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Gm45651-201ENSMUST00000210857 335 ntBASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3aQ3ULJ3 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm13172-201ENSMUST00000118685 256 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm15333-201ENSMUST00000118825 364 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm13808-201ENSMUST00000121353 184 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm12807-201ENSMUST00000121546 962 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm13214-201ENSMUST00000122137 408 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm22116-201ENSMUST00000158791 141 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 Gm16125-201ENSMUST00000159003 339 ntBASIC5.18□□□□□ -1.58
Upf3aQ3ULJ3 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms