Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm31511-201ENSMUST00000193134 657 ntBASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Gm35843-201ENSMUST00000193716 666 ntBASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Gm34015-201ENSMUST00000194908 451 ntBASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Gm18410-201ENSMUST00000207199 577 ntBASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 LOC665443-201ENSMUST00000212284 796 ntBASIC5.49□□□□□ -1.53
Usp39Q3TIX9 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Gm6056-201ENSMUST00000221253 488 ntBASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Gm9269-201ENSMUST00000221661 578 ntBASIC5.49□□□□□ -1.53
Usp39Q3TIX9 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.49□□□□□ -1.53
Usp39Q3TIX9 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 AC153881.3-201ENSMUST00000218494 1561 ntBASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Usp39Q3TIX9 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm20679-201ENSMUST00000177285 1402 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm29730-201ENSMUST00000192986 1396 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm25919-201ENSMUST00000104271 132 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm22372-201ENSMUST00000104589 136 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm11561-201ENSMUST00000117429 417 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm13890-201ENSMUST00000117578 390 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm15094-201ENSMUST00000118394 1131 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm13440-201ENSMUST00000121665 496 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm12293-201ENSMUST00000121898 590 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm18128-201ENSMUST00000172625 511 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Mirt2-201ENSMUST00000175179 285 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm27024-201ENSMUST00000182561 755 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm28661-201ENSMUST00000188231 681 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm37288-201ENSMUST00000193963 334 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm43148-201ENSMUST00000198237 520 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm45658-201ENSMUST00000209197 580 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 AC153541.1-201ENSMUST00000213786 294 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 AC126554.4-201ENSMUST00000221055 409 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm18413-201ENSMUST00000221573 655 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 AC154727.1-201ENSMUST00000226537 499 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 AC115735.3-201ENSMUST00000227757 513 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp39Q3TIX9 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms