Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 AC141425.1-201ENSMUST00000224989 265 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 AC154806.3-201ENSMUST00000227376 439 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 AC154806.4-201ENSMUST00000227406 439 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 Gm7099-201ENSMUST00000080066 554 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 Mir298-201ENSMUST00000083476 82 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx4Q07424 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx4Q07424 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx4Q07424 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Cdx4Q07424 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.53□□□□□ -1.68
Cdx4Q07424 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Cdx4Q07424 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC4.53□□□□□ -1.68
Cdx4Q07424 Gm15011-201ENSMUST00000117724 1480 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC4.53□□□□□ -1.68
Cdx4Q07424 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC4.53□□□□□ -1.68
Cdx4Q07424 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Cdx4Q07424 Gm37897-201ENSMUST00000192613 3561 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Cdx4Q07424 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC4.53□□□□□ -1.68
Cdx4Q07424 Gm42798-201ENSMUST00000200853 3972 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 Gm45632-201ENSMUST00000211532 1888 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx4Q07424 Gm42510-201ENSMUST00000196470 2258 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx4Q07424 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC4.53□□□□□ -1.68
Cdx4Q07424 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cdx4Q07424 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx4Q07424 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.53□□□□□ -1.68
Cdx4Q07424 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx4Q07424 Gm37894-201ENSMUST00000195416 2599 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC4.53□□□□□ -1.68
Cdx4Q07424 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC4.53□□□□□ -1.69
Cdx4Q07424 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
Cdx4Q07424 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx4Q07424 AC115910.1-201ENSMUST00000221188 4275 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx4Q07424 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx4Q07424 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx4Q07424 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx4Q07424 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx4Q07424 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx4Q07424 Mir700-201ENSMUST00000102169 79 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Mir711-201ENSMUST00000102188 82 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Mir190b-201ENSMUST00000104803 80 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm2199-201ENSMUST00000119065 874 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm8430-201ENSMUST00000119780 471 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm14805-201ENSMUST00000120172 340 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm14982-201ENSMUST00000121102 442 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm11848-201ENSMUST00000121207 973 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm23212-201ENSMUST00000122718 60 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm9428-201ENSMUST00000127214 769 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm24719-201ENSMUST00000157520 110 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm23050-201ENSMUST00000158775 165 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm26057-201ENSMUST00000178099 165 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Mir6971-201ENSMUST00000183497 63 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm8367-201ENSMUST00000186145 887 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm37946-201ENSMUST00000192064 347 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm29736-201ENSMUST00000198189 385 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm42461-201ENSMUST00000198627 1150 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm44940-201ENSMUST00000206225 1247 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm18205-201ENSMUST00000209215 841 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm45724-201ENSMUST00000213031 420 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm45789-201ENSMUST00000213038 364 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm8125-201ENSMUST00000216602 738 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Gm36262-201ENSMUST00000223274 499 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 AC239878.2-201ENSMUST00000224048 464 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 AC163743.1-201ENSMUST00000224309 270 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 AC154767.2-201ENSMUST00000224584 414 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 AC160930.1-201ENSMUST00000227194 337 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Cdx4Q07424 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC4.52□□□□□ -1.69
Cdx4Q07424 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms