Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
Col8a1Q00780 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm37913-201ENSMUST00000192925 2544 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm26079-201ENSMUST00000104066 133 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm13087-201ENSMUST00000118298 256 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm14115-201ENSMUST00000119242 482 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm14267-201ENSMUST00000119751 496 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm13121-201ENSMUST00000120637 632 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.25□□□□□ -1.57
Col8a1Q00780 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm23280-201ENSMUST00000157905 139 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm23031-201ENSMUST00000157998 119 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm23149-201ENSMUST00000158837 230 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm5929-201ENSMUST00000166883 487 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Mir5103-201ENSMUST00000175111 79 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm6061-201ENSMUST00000175860 492 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm27985-201ENSMUST00000185112 378 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm29281-201ENSMUST00000188077 381 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm37681-201ENSMUST00000193880 727 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm38670-201ENSMUST00000199248 77 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm2011-203ENSMUST00000203750 435 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm45226-201ENSMUST00000206602 288 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm44718-201ENSMUST00000206886 359 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm19900-201ENSMUST00000207285 576 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm18850-201ENSMUST00000211578 388 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 AC152951.1-201ENSMUST00000218907 266 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm10264-201ENSMUST00000220589 429 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm4057-201ENSMUST00000221407 368 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 CT009733.1-201ENSMUST00000225322 425 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm24917-201ENSMUST00000083935 104 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm38077-201ENSMUST00000193657 3245 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.25□□□□□ -1.57
Col8a1Q00780 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.24□□□□□ -1.57
Col8a1Q00780 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Col8a1Q00780 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col8a1Q00780 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms