Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Rfx1P48377 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rfx1P48377 Gm29730-201ENSMUST00000192986 1396 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC7.11□□□□□ -1.27
Rfx1P48377 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Rfx1P48377 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Rfx1P48377 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rfx1P48377 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC7.11□□□□□ -1.27
Rfx1P48377 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Rfx1P48377 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Rfx1P48377 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rfx1P48377 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rfx1P48377 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Rfx1P48377 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC7.11□□□□□ -1.27
Rfx1P48377 Gm16073-201ENSMUST00000116032 517 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Gm13755-201ENSMUST00000118509 305 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Amd-ps1-201ENSMUST00000120127 994 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Gm14531-201ENSMUST00000120845 285 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Gm15502-201ENSMUST00000121449 208 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Rfx1P48377 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Rfx1P48377 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC7.11□□□□□ -1.27
Rfx1P48377 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC7.11□□□□□ -1.27
Rfx1P48377 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC7.11□□□□□ -1.27
Rfx1P48377 Gm24939-201ENSMUST00000158325 137 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Gm17054-201ENSMUST00000169811 259 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Rfx1P48377 Snord116l12-201ENSMUST00000179816 94 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rfx1P48377 Mir6908-201ENSMUST00000184056 63 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Gm27601-201ENSMUST00000184794 127 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Rfx1P48377 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC7.11□□□□□ -1.27
Rfx1P48377 Gm42896-201ENSMUST00000201249 1113 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Gm43227-201ENSMUST00000202239 677 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Rfx1P48377 Gm4587-201ENSMUST00000209135 637 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC7.11□□□□□ -1.27
Rfx1P48377 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC7.11□□□□□ -1.27
Rfx1P48377 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 CT030195.1-201ENSMUST00000223887 378 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Rfx1P48377 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Rfx1P48377 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Rfx1P48377 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Rfx1P48377 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rfx1P48377 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC7.11□□□□□ -1.27
Rfx1P48377 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Rfx1P48377 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Rfx1P48377 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Rfx1P48377 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Rfx1P48377 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Rfx1P48377 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Rfx1P48377 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rfx1P48377 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC7.11□□□□□ -1.27
Rfx1P48377 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rfx1P48377 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rfx1P48377 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rfx1P48377 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Rfx1P48377 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Rfx1P48377 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Rfx1P48377 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Rfx1P48377 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Rfx1P48377 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 Gm38036-201ENSMUST00000194586 3564 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm26289-201ENSMUST00000104169 131 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm7927-201ENSMUST00000118818 880 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm12607-201ENSMUST00000120724 493 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm12175-201ENSMUST00000122081 345 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm15335-201ENSMUST00000122442 411 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC7.1□□□□□ -1.27
Rfx1P48377 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 Gm24910-201ENSMUST00000157289 272 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm16102-201ENSMUST00000160955 420 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm20454-201ENSMUST00000172713 221 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm22776-201ENSMUST00000178634 94 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Rfx1P48377 Gm23767-201ENSMUST00000179278 94 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 Gm27539-201ENSMUST00000184971 224 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC7.1□□□□□ -1.27
Rfx1P48377 Gm37966-201ENSMUST00000193122 326 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm37054-201ENSMUST00000193481 543 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC7.1□□□□□ -1.27
Rfx1P48377 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Rfx1P48377 Gm43354-201ENSMUST00000196862 346 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm42465-201ENSMUST00000197036 492 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Igkv12-49-201ENSMUST00000197714 278 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm42818-201ENSMUST00000198869 987 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm5284-201ENSMUST00000199053 903 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm43487-201ENSMUST00000200331 1031 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 Gm18103-201ENSMUST00000216621 779 ntBASIC7.1□□□□□ -1.27
Rfx1P48377 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC7.1□□□□□ -1.27
Rfx1P48377 AC160114.2-201ENSMUST00000223021 300 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms