Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.68□□□□□ -1.66
Cdx2P43241 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.68□□□□□ -1.66
Cdx2P43241 Gm44319-201ENSMUST00000196974 93 ntBASIC4.68□□□□□ -1.66
Cdx2P43241 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.68□□□□□ -1.66
Cdx2P43241 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx2P43241 AC161252.2-201ENSMUST00000224978 374 ntBASIC4.68□□□□□ -1.66
Cdx2P43241 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.68□□□□□ -1.66
Cdx2P43241 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx2P43241 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Cdx2P43241 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Cdx2P43241 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx2P43241 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Cdx2P43241 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx2P43241 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx2P43241 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx2P43241 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx2P43241 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx2P43241 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx2P43241 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.68□□□□□ -1.66
Cdx2P43241 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.68□□□□□ -1.66
Cdx2P43241 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Cdx2P43241 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Cdx2P43241 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC4.67□□□□□ -1.66
Cdx2P43241 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx2P43241 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx2P43241 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx2P43241 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx2P43241 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Cdx2P43241 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx2P43241 Snord66-201ENSMUST00000104051 75 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Gm24124-201ENSMUST00000104103 132 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Gm23594-201ENSMUST00000104307 134 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Gm22493-201ENSMUST00000104494 132 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Gm15779-201ENSMUST00000117470 412 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Gm14933-201ENSMUST00000118840 481 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Gm23501-201ENSMUST00000157744 256 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cdx2P43241 Gm20614-201ENSMUST00000177106 632 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Gm28615-201ENSMUST00000187527 482 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Gm37632-201ENSMUST00000191811 1142 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Gm37073-201ENSMUST00000192469 1222 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC4.67□□□□□ -1.66
Cdx2P43241 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Cdx2P43241 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cdx2P43241 Gm8942-201ENSMUST00000217892 400 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 AC121137.1-201ENSMUST00000225272 602 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx2P43241 Mecom-201ENSMUST00000061088 348 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx2P43241 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx2P43241 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cdx2P43241 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.67□□□□□ -1.66
Cdx2P43241 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx2P43241 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cdx2P43241 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
Cdx2P43241 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.67□□□□□ -1.66
Cdx2P43241 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx2P43241 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Cdx2P43241 AC115910.1-201ENSMUST00000221188 4275 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 AW046200-203ENSMUST00000211787 2479 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Cdx2P43241 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Cdx2P43241 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Cdx2P43241 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Gm25726-201ENSMUST00000104529 129 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Gm6062-201ENSMUST00000120462 631 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 Gm16250-201ENSMUST00000148974 256 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 Gm8221-201ENSMUST00000178052 564 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Gm18802-201ENSMUST00000186270 888 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Gm21803-201ENSMUST00000188897 693 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Gm37088-201ENSMUST00000193887 406 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 Gm17951-201ENSMUST00000198536 496 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.66□□□□□ -1.66
Cdx2P43241 Gm18537-201ENSMUST00000205709 989 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.66□□□□□ -1.66
Cdx2P43241 AC132384.6-201ENSMUST00000218976 1206 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Gm24166-201ENSMUST00000082724 135 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Cdx2P43241 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Cdx2P43241 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms