Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.04□□□□□ -1.6
Cxcl12P40224 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.04□□□□□ -1.6
Cxcl12P40224 Gm23099-201ENSMUST00000083454 139 ntBASIC5.04□□□□□ -1.6
Cxcl12P40224 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cxcl12P40224 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Cxcl12P40224 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Cxcl12P40224 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cxcl12P40224 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.04□□□□□ -1.6
Cxcl12P40224 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Cxcl12P40224 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cxcl12P40224 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cxcl12P40224 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cxcl12P40224 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cxcl12P40224 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.04□□□□□ -1.6
Cxcl12P40224 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cxcl12P40224 Gm9597-202ENSMUST00000227632 1387 ntBASIC5.04□□□□□ -1.6
Cxcl12P40224 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cxcl12P40224 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cxcl12P40224 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cxcl12P40224 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cxcl12P40224 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Cxcl12P40224 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cxcl12P40224 Gm14086-201ENSMUST00000117152 173 ntBASIC5.03□□□□□ -1.6
Cxcl12P40224 Gm12231-201ENSMUST00000119447 695 ntBASIC5.03□□□□□ -1.6
Cxcl12P40224 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5.03□□□□□ -1.6
Cxcl12P40224 Gm16107-201ENSMUST00000162523 862 ntBASIC5.03□□□□□ -1.6
Cxcl12P40224 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Cxcl12P40224 Gm18802-201ENSMUST00000186270 888 ntBASIC5.03□□□□□ -1.6
Cxcl12P40224 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.03□□□□□ -1.6
Cxcl12P40224 Gm43405-201ENSMUST00000198642 337 ntBASIC5.03□□□□□ -1.6
Cxcl12P40224 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.03□□□□□ -1.6
Cxcl12P40224 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.03□□□□□ -1.6
Cxcl12P40224 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.03□□□□□ -1.6
Cxcl12P40224 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.03□□□□□ -1.6
Cxcl12P40224 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cxcl12P40224 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Cxcl12P40224 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Cxcl12P40224 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cxcl12P40224 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cxcl12P40224 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cxcl12P40224 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Cxcl12P40224 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cxcl12P40224 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cxcl12P40224 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.03□□□□□ -1.6
Cxcl12P40224 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cxcl12P40224 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cxcl12P40224 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cxcl12P40224 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cxcl12P40224 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Cxcl12P40224 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Cxcl12P40224 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cxcl12P40224 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cxcl12P40224 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.02□□□□□ -1.61
Cxcl12P40224 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cxcl12P40224 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Cxcl12P40224 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.02□□□□□ -1.61
Cxcl12P40224 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cxcl12P40224 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cxcl12P40224 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Cxcl12P40224 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm15603-201ENSMUST00000119252 492 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm13867-201ENSMUST00000120844 395 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm25058-201ENSMUST00000157365 128 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm22536-201ENSMUST00000158171 134 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm24363-201ENSMUST00000158440 311 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm25907-201ENSMUST00000158486 125 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm43968-201ENSMUST00000203388 389 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm6562-201ENSMUST00000221903 464 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm7808-201ENSMUST00000082002 387 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Cxcl12P40224 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cxcl12P40224 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.02□□□□□ -1.61
Cxcl12P40224 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.02□□□□□ -1.61
Cxcl12P40224 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Cxcl12P40224 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Cxcl12P40224 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cxcl12P40224 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Cxcl12P40224 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.01□□□□□ -1.61
Cxcl12P40224 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.01□□□□□ -1.61
Cxcl12P40224 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cxcl12P40224 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Cxcl12P40224 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Cxcl12P40224 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.01□□□□□ -1.61
Cxcl12P40224 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cxcl12P40224 Gm25748-201ENSMUST00000175487 70 ntBASIC5.01□□□□□ -1.61
Cxcl12P40224 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Cxcl12P40224 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Cxcl12P40224 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms