Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.58□□□□□ -1.52
LdlrP35951 Gm42814-201ENSMUST00000199370 460 ntBASIC5.58□□□□□ -1.52
LdlrP35951 Gm43493-201ENSMUST00000199837 202 ntBASIC5.58□□□□□ -1.52
LdlrP35951 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.58□□□□□ -1.52
LdlrP35951 Gm44972-201ENSMUST00000206419 406 ntBASIC5.58□□□□□ -1.52
LdlrP35951 Gm44961-201ENSMUST00000207450 196 ntBASIC5.58□□□□□ -1.52
LdlrP35951 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.58□□□□□ -1.52
LdlrP35951 Gm5338-201ENSMUST00000209530 639 ntBASIC5.58□□□□□ -1.52
LdlrP35951 Gm6477-201ENSMUST00000217098 764 ntBASIC5.58□□□□□ -1.52
LdlrP35951 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.58□□□□□ -1.52
LdlrP35951 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC5.58□□□□□ -1.52
LdlrP35951 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.58□□□□□ -1.52
LdlrP35951 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.58□□□□□ -1.52
LdlrP35951 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.58□□□□□ -1.52
LdlrP35951 AC150560.3-201ENSMUST00000227442 455 ntBASIC5.58□□□□□ -1.52
LdlrP35951 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LdlrP35951 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LdlrP35951 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LdlrP35951 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LdlrP35951 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LdlrP35951 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LdlrP35951 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LdlrP35951 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.58□□□□□ -1.52
LdlrP35951 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.58□□□□□ -1.52
LdlrP35951 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LdlrP35951 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LdlrP35951 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
LdlrP35951 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LdlrP35951 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
LdlrP35951 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
LdlrP35951 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LdlrP35951 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LdlrP35951 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LdlrP35951 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
LdlrP35951 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LdlrP35951 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.57□□□□□ -1.52
LdlrP35951 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LdlrP35951 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.57□□□□□ -1.52
LdlrP35951 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LdlrP35951 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm3943-201ENSMUST00000118606 718 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm13815-201ENSMUST00000119963 412 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm16179-201ENSMUST00000120685 373 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Klra11-ps-201ENSMUST00000122033 810 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LdlrP35951 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.57□□□□□ -1.52
LdlrP35951 Gm22794-201ENSMUST00000157228 306 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm24477-201ENSMUST00000157438 103 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Scarna6-201ENSMUST00000158656 265 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LdlrP35951 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
LdlrP35951 Gm18128-201ENSMUST00000172625 511 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm23799-201ENSMUST00000175559 120 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Mir6986-201ENSMUST00000184483 58 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.57□□□□□ -1.52
LdlrP35951 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC5.57□□□□□ -1.52
LdlrP35951 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm37503-201ENSMUST00000192088 319 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm37098-201ENSMUST00000192290 244 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm43456-201ENSMUST00000202519 457 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm6261-201ENSMUST00000204707 760 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm7890-201ENSMUST00000204877 601 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LdlrP35951 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LdlrP35951 AC153541.1-201ENSMUST00000213786 294 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LdlrP35951 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LdlrP35951 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LdlrP35951 Gm8672-201ENSMUST00000221200 332 ntBASIC5.57□□□□□ -1.52
LdlrP35951 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.57□□□□□ -1.52
LdlrP35951 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.57□□□□□ -1.52
LdlrP35951 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC5.57□□□□□ -1.52
LdlrP35951 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
LdlrP35951 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.57□□□□□ -1.52
LdlrP35951 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.57□□□□□ -1.52
LdlrP35951 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LdlrP35951 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
LdlrP35951 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LdlrP35951 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
LdlrP35951 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LdlrP35951 Gm23737-201ENSMUST00000082547 159 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm24707-201ENSMUST00000082812 107 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Mir143-201ENSMUST00000083511 63 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm23104-201ENSMUST00000083722 104 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
LdlrP35951 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.57□□□□□ -1.52
LdlrP35951 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LdlrP35951 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LdlrP35951 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.57□□□□□ -1.52
LdlrP35951 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LdlrP35951 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LdlrP35951 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.57□□□□□ -1.52
LdlrP35951 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LdlrP35951 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LdlrP35951 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms