Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Gm9208-201ENSMUST00000120468 948 ntBASIC5.29□□□□□ -1.56
Chmp6P0C0A3 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Gm23673-201ENSMUST00000157474 298 ntBASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Gm10292-202ENSMUST00000193165 585 ntBASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Gm2147-201ENSMUST00000193588 639 ntBASIC5.29□□□□□ -1.56
Chmp6P0C0A3 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Gm44648-201ENSMUST00000208267 329 ntBASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Gm45789-201ENSMUST00000213038 364 ntBASIC5.29□□□□□ -1.56
Chmp6P0C0A3 AC105169.1-201ENSMUST00000218912 1294 ntBASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.29□□□□□ -1.56
Chmp6P0C0A3 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Gm6776-201ENSMUST00000057752 900 ntBASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Mir342-201ENSMUST00000083502 99 ntBASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.29□□□□□ -1.56
Chmp6P0C0A3 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gm23746-201ENSMUST00000104229 125 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gm12704-201ENSMUST00000119789 464 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gm23082-201ENSMUST00000157852 133 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Mir3090-201ENSMUST00000175597 87 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gm43631-201ENSMUST00000202011 369 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gm7040-201ENSMUST00000223271 443 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gm23626-201ENSMUST00000082458 133 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp6P0C0A3 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Gm24578-201ENSMUST00000103970 129 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Gm14603-201ENSMUST00000121275 448 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Gm29356-201ENSMUST00000186935 373 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Gm42579-201ENSMUST00000200512 734 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Gm43895-201ENSMUST00000203219 855 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms