Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm25726-201ENSMUST00000104529 129 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm12852-201ENSMUST00000119478 719 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm8051-201ENSMUST00000120464 466 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm16571-201ENSMUST00000159112 291 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm8221-201ENSMUST00000178052 564 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm28304-201ENSMUST00000185977 312 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm29256-201ENSMUST00000189094 312 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm28484-201ENSMUST00000190606 312 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm44253-201ENSMUST00000203387 628 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 AC154296.3-201ENSMUST00000214427 712 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm6065-201ENSMUST00000081336 492 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm6043-201ENSMUST00000099961 492 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm25537-201ENSMUST00000103851 109 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm14575-201ENSMUST00000117210 560 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm14750-201ENSMUST00000118262 516 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm14610-201ENSMUST00000118358 966 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm9320-201ENSMUST00000184151 473 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Gm46190-201ENSMUST00000219650 427 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.29□□□□□ -1.56
Scn3aA2ASI5 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Gm27037-201ENSMUST00000182270 960 ntBASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Mir5121-201ENSMUST00000198528 74 ntBASIC5.28□□□□□ -1.56
Scn3aA2ASI5 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 AC192333.5-201ENSMUST00000224620 2350 ntBASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scn3aA2ASI5 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Gm12112-201ENSMUST00000117772 231 ntBASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Gm4852-201ENSMUST00000121202 729 ntBASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Gm22819-201ENSMUST00000157445 303 ntBASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Gm27165-201ENSMUST00000183951 232 ntBASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Gm42694-201ENSMUST00000196951 358 ntBASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Gm42999-201ENSMUST00000198049 786 ntBASIC5.27□□□□□ -1.57
Scn3aA2ASI5 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scn3aA2ASI5 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.27□□□□□ -1.57
Scn3aA2ASI5 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Gm16415-201ENSMUST00000080097 489 ntBASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Gm23875-201ENSMUST00000083711 318 ntBASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Scn3aA2ASI5 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Scn3aA2ASI5 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms