Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm14655-201ENSMUST00000120124 578 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm17014-201ENSMUST00000120765 168 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm12422-201ENSMUST00000121431 302 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm6632-201ENSMUST00000168425 954 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm17044-201ENSMUST00000168549 828 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm19791-201ENSMUST00000180398 859 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm8669-201ENSMUST00000183839 945 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm17981-201ENSMUST00000191109 739 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm44003-201ENSMUST00000203024 490 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm2645-201ENSMUST00000223516 547 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Trim3Q9R1R2 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Snord65-201ENSMUST00000104269 72 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm12401-201ENSMUST00000118435 228 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm15772-201ENSMUST00000118533 438 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm12808-201ENSMUST00000120597 404 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm13430-201ENSMUST00000121366 288 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm23537-201ENSMUST00000157536 330 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm24690-201ENSMUST00000157759 97 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm25865-201ENSMUST00000158247 104 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm4134-201ENSMUST00000173244 563 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm26318-201ENSMUST00000176507 96 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm26925-201ENSMUST00000182470 957 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm29596-201ENSMUST00000185710 385 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm8861-201ENSMUST00000196346 832 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm42666-201ENSMUST00000201954 152 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm44776-201ENSMUST00000207212 381 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm40692-201ENSMUST00000220411 491 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm24763-201ENSMUST00000083688 190 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim3Q9R1R2 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms